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Genotype Selection - Genes

6340
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Association Results No data found. Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 14701 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 41 of 41 Searched by gene IDs retrieved from gene search.
dbGaP Studies  Retrieving... Searched by traits retrieved from page 1 of association results.
Genome View  Retrieving... 
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Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
SCNN1Gsodium channel epithelial 1 subunit gamma 16 : 23,182,745 - 23,216,883600761
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["16", 23182745, 23216883] ], "markers": { "16": [ ["SCNN1G", "NC_000016.10", 23182745, 23216883, "sodium channel epithelial 1 subunit gamma", "BESC3, ENaCg, ENaCgamma, LDLS2, PHA1, PHA1B3, SCNEG", 6340] ] }, "unmapped": [ ] } }

Get information.Genome View

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Summary
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

No association data found.
Modify Search { "section": "assoc", "summary": "No data found.", "mesh": [ ], "genes": [], "snps": [], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 0 }

Get information.SNPs

1 - 50 of 14701 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2141947907 16 : 23,217,355 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
2 rs2141947905 16 : 23,217,354 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
3 rs2141947873 16 : 23,217,306 downstream_transcript_variant, 500B_downstream_variant SCNN1G Yes
4 rs2141947848 16 : 23,217,277 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
5 rs2141947782 16 : 23,217,199 downstream_transcript_variant, 500B_downstream_variant SCNN1G Yes
6 rs2141947731 16 : 23,217,117 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
7 rs2141947701 16 : 23,217,036 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
8 rs2141947687 16 : 23,217,027 downstream_transcript_variant, 500B_downstream_variant SCNN1G Yes
9 rs2141947626 16 : 23,216,942 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
10 rs2141947623 16 : 23,216,932 downstream_transcript_variant, 500B_downstream_variant SCNN1G n/a
11 rs2141947575 16 : 23,216,823 3_prime_UTR_variant SCNN1G Yes
12 rs2141947549 16 : 23,216,718 3_prime_UTR_variant SCNN1G n/a
13 rs2141947509 16 : 23,216,625 3_prime_UTR_variant SCNN1G n/a
14 rs2141947494 16 : 23,216,613 3_prime_UTR_variant SCNN1G Yes
15 rs2141947439 16 : 23,216,516 3_prime_UTR_variant SCNN1G Yes
16 rs2141947386 16 : 23,216,409 3_prime_UTR_variant SCNN1G n/a
17 rs2141947384 16 : 23,216,401 3_prime_UTR_variant SCNN1G Yes
18 rs2141947381 16 : 23,216,400 3_prime_UTR_variant SCNN1G Yes
19 rs2141947376 16 : 23,216,399 3_prime_UTR_variant SCNN1G n/a
20 rs2141947353 16 : 23,216,364 3_prime_UTR_variant SCNN1G n/a
21 rs2141947337 16 : 23,216,305 3_prime_UTR_variant SCNN1G n/a
22 rs2141947286 16 : 23,216,229 3_prime_UTR_variant SCNN1G Yes
23 rs2141947260 16 : 23,216,172 3_prime_UTR_variant SCNN1G n/a
24 rs2141947257 16 : 23,216,167 3_prime_UTR_variant SCNN1G n/a
25 rs2141947253 16 : 23,216,151 3_prime_UTR_variant SCNN1G n/a
26 rs2141947252 16 : 23,216,146 3_prime_UTR_variant SCNN1G Yes
27 rs2141947182 16 : 23,216,066 3_prime_UTR_variant SCNN1G n/a
28 rs2141947126 16 : 23,215,994 3_prime_UTR_variant SCNN1G n/a
29 rs2141946923 16 : 23,215,626 3_prime_UTR_variant SCNN1G n/a
30 rs2141946912 16 : 23,215,586 3_prime_UTR_variant SCNN1G n/a
31 rs2141946891 16 : 23,215,555 3_prime_UTR_variant SCNN1G Yes
32 rs2141946779 16 : 23,215,398 missense_variant, coding_sequence_variant SCNN1G n/a
33 rs2141946672 16 : 23,215,287 missense_variant, coding_sequence_variant SCNN1G Yes
34 rs2141946607 16 : 23,215,218 coding_sequence_variant, stop_gained SCNN1G n/a
35 rs2141946567 16 : 23,215,184 synonymous_variant, coding_sequence_variant SCNN1G n/a
36 rs2141946564 16 : 23,215,173 missense_variant, coding_sequence_variant SCNN1G n/a
37 rs2141946421 16 : 23,214,983 intron_variant SCNN1G n/a
38 rs2141946369 16 : 23,214,911 intron_variant SCNN1G Yes
39 rs2141946358 16 : 23,214,898 intron_variant SCNN1G n/a
40 rs2141946357 16 : 23,214,896 intron_variant SCNN1G Yes
41 rs2141946351 16 : 23,214,861 intron_variant SCNN1G Yes
42 rs2141946256 16 : 23,214,716 missense_variant, coding_sequence_variant SCNN1G Yes
43 rs2141946233 16 : 23,214,685 intron_variant SCNN1G n/a
44 rs2141946205 16 : 23,214,637 intron_variant SCNN1G n/a
45 rs2141946172 16 : 23,214,568 intron_variant SCNN1G n/a
46 rs2141946123 16 : 23,214,497 intron_variant SCNN1G Yes
47 rs2141946025 16 : 23,214,347 intron_variant SCNN1G n/a
48 rs2141945978 16 : 23,214,263 intron_variant SCNN1G Yes
49 rs2141945940 16 : 23,214,190 intron_variant SCNN1G Yes
50 rs2141945882 16 : 23,214,084 intron_variant SCNN1G Yes
{ "section": "SNP", "summary": "1 - 50 of 14701", "genes": [], "retstart": 0, "pageSize": 50, "count": 14701, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gaphttps.ncbi.nlm.nih.gov80gapphegenihttps://https.ncbi.nlm.nih.gov/gaphttps://https.ncbi.nlm.nih.govhttps://https.ncbi.nlm.nih.gov/gap/phegeni/gaphttps://https.ncbi.nlm.nih.gov/gap/phegeni/phegenitrueCE8B4966791C4641_1385SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap1506340 CE8B4966791C4641_1385SID165UbUQrEBURUYwByUvV9sGsPI1MAMBQ-VV8dobNWY-5j@CE8B4966791C4641_1385SID
1 - 41 of 41 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
40FHS_eQTL094383147562228122634phs000342phs000363
41FHS_eGene_leadQTLs0111562228122634phs000342phs000363
46GTEx_Adipose_Subcutaneous101137023715323phs000424.v6phs000424.v6
47GTEx_Adipose_Visceral_Omentum101123423715323phs000424.v6phs000424.v6
48GTEx_Adrenal_Gland101115923715323phs000424.v6phs000424.v6
49GTEx_Artery_Aorta101124723715323phs000424.v6phs000424.v6
50GTEx_Artery_Coronary303314123715323phs000424.v6phs000424.v6
51GTEx_Artery_Tibial101136023715323phs000424.v6phs000424.v6
52GTEx_Brain_Anterior_cingulate_cortex_BA2420229723715323phs000424.v6phs000424.v6
54GTEx_Brain_Cerebellar_Hemisphere101111423715323phs000424.v6phs000424.v6
55GTEx_Brain_Cerebellum101113823715323phs000424.v6phs000424.v6
56GTEx_Brain_Cortex101112723715323phs000424.v6phs000424.v6
57GTEx_Brain_Frontal_Cortex_BA9101111523715323phs000424.v6phs000424.v6
58GTEx_Brain_Hippocampus101110223715323phs000424.v6phs000424.v6
60GTEx_Brain_Nucleus_accumbens_basal_ganglia101112423715323phs000424.v6phs000424.v6
61GTEx_Brain_Putamen_basal_ganglia101110323715323phs000424.v6phs000424.v6
62GTEx_Breast_Mammary_Tissue202221923715323phs000424.v6phs000424.v6
63GTEx_Cells_EBV-transformed_lymphocytes202213223715323phs000424.v6phs000424.v6
64GTEx_Cells_Transformed_fibroblasts101130523715323phs000424.v6phs000424.v6
65GTEx_Colon_Sigmoid303317323715323phs000424.v6phs000424.v6
66GTEx_Colon_Transverse404420723715323phs000424.v6phs000424.v6
67GTEx_Esophagus_Gastroesophageal_Junction303317523715323phs000424.v6phs000424.v6
68GTEx_Esophagus_Mucosa101132923715323phs000424.v6phs000424.v6
69GTEx_Esophagus_Muscularis101128123715323phs000424.v6phs000424.v6
71GTEx_Heart_Left_Ventricle101124823715323phs000424.v6phs000424.v6
72GTEx_Liver101113823715323phs000424.v6phs000424.v6
73GTEx_Lung202233823715323phs000424.v6phs000424.v6
74GTEx_Muscle_Skeletal101145423715323phs000424.v6phs000424.v6
75GTEx_Nerve_Tibial202233323715323phs000424.v6phs000424.v6
76GTEx_Ovary101110923715323phs000424.v6phs000424.v6
77GTEx_Pancreas202219423715323phs000424.v6phs000424.v6
78GTEx_Pituitary101112423715323phs000424.v6phs000424.v6
79GTEx_Prostate101112023715323phs000424.v6phs000424.v6
80GTEx_Skin_Not_Sun_Exposed_Suprapubic302326923715323phs000424.v6phs000424.v6
81GTEx_Skin_Sun_Exposed_Lower_leg101138823715323phs000424.v6phs000424.v6
82GTEx_Small_Intestine_Terminal_Ileum101110523715323phs000424.v6phs000424.v6
84GTEx_Stomach101120223715323phs000424.v6phs000424.v6
85GTEx_Testis303319923715323phs000424.v6phs000424.v6
86GTEx_Thyroid303334723715323phs000424.v6phs000424.v6
87GTEx_Uterus10118923715323phs000424.v6phs000424.v6
88GTEx_Vagina10119823715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 41 of 41"}
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