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Genotype Selection - Genes

8662
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Association Results No data found. Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 15180 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 46 of 46 Searched by gene IDs retrieved from gene search.
dbGaP Studies No data found.Searched by traits retrieved from page 1 of association results.
Genome View 1 gene over 1 chromosome.
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Get information.

Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
EIF3Beukaryotic translation initiation factor 3 subunit B 7 : 2,354,086 - 2,380,745603917
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["7", 2354086, 2380745] ], "markers": { "7": [ ["EIF3B", "NC_000007.14", 2354086, 2380745, "eukaryotic translation initiation factor 3 subunit B", "EIF3-ETA, EIF3-P110, EIF3-P116, EIF3S9, PRT1", 8662] ] }, "unmapped": [ ] } }

Get information.Genome View

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Summary
1 gene searched by gene names and/or gene IDs over 1 chromosome.
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

No association data found.
Modify Search { "section": "assoc", "summary": "No data found.", "mesh": [ ], "genes": [], "snps": [], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 0 }

Get information.SNPs

1 - 50 of 15180 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2115351669 7 : 2,381,246 EIF3B n/a
2 rs2115351507 7 : 2,381,195 500B_downstream_variant, downstream_transcript_variant EIF3B Yes
3 rs2115351190 7 : 2,381,091 500B_downstream_variant, downstream_transcript_variant EIF3B n/a
4 rs2115351081 7 : 2,381,064 500B_downstream_variant, downstream_transcript_variant EIF3B Yes
5 rs2115350909 7 : 2,380,998 500B_downstream_variant, downstream_transcript_variant EIF3B n/a
6 rs2115349798 7 : 2,380,632 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
7 rs2115349695 7 : 2,380,565 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B Yes
8 rs2115349576 7 : 2,380,531 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B Yes
9 rs2115349537 7 : 2,380,521 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
10 rs2115349530 7 : 2,380,518 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
11 rs2115349489 7 : 2,380,506 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
12 rs2115349401 7 : 2,380,484 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
13 rs2115349398 7 : 2,380,483 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
14 rs2115349377 7 : 2,380,475 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B Yes
15 rs2115348922 7 : 2,380,343 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B n/a
16 rs2115348905 7 : 2,380,332 3_prime_UTR_variant, genic_downstream_transcript_variant EIF3B Yes
17 rs2115348719 7 : 2,380,266 3_prime_UTR_variant, intron_variant, genic_downstream_transcript_variant EIF3B Yes
18 rs2115348629 7 : 2,380,238 3_prime_UTR_variant, intron_variant, genic_downstream_transcript_variant EIF3B n/a
19 rs2115348585 7 : 2,380,224 3_prime_UTR_variant, intron_variant, genic_downstream_transcript_variant EIF3B n/a
20 rs2115348540 7 : 2,380,214 3_prime_UTR_variant, intron_variant, genic_downstream_transcript_variant EIF3B n/a
21 rs2115348509 7 : 2,380,200 3_prime_UTR_variant, intron_variant, genic_downstream_transcript_variant EIF3B Yes
22 rs2115348494 7 : 2,380,196 3_prime_UTR_variant, intron_variant, genic_downstream_transcript_variant EIF3B n/a
23 rs2115348376 7 : 2,380,155 intron_variant, genic_downstream_transcript_variant EIF3B n/a
24 rs2115348325 7 : 2,380,139 intron_variant, genic_downstream_transcript_variant EIF3B n/a
25 rs2115348288 7 : 2,380,126 intron_variant, genic_downstream_transcript_variant EIF3B n/a
26 rs2115348234 7 : 2,380,109 intron_variant, genic_downstream_transcript_variant EIF3B n/a
27 rs2115348155 7 : 2,380,082 intron_variant, genic_downstream_transcript_variant EIF3B n/a
28 rs2115348105 7 : 2,380,067 intron_variant, genic_downstream_transcript_variant EIF3B n/a
29 rs2115348099 7 : 2,380,065 intron_variant, genic_downstream_transcript_variant EIF3B n/a
30 rs2115348072 7 : 2,380,046 intron_variant, genic_downstream_transcript_variant EIF3B n/a
31 rs2115347992 7 : 2,380,015 intron_variant, genic_downstream_transcript_variant EIF3B n/a
32 rs2115347706 7 : 2,379,908 intron_variant, genic_downstream_transcript_variant EIF3B Yes
33 rs2115347515 7 : 2,379,840 intron_variant, genic_downstream_transcript_variant EIF3B n/a
34 rs2115347440 7 : 2,379,815 intron_variant, genic_downstream_transcript_variant EIF3B n/a
35 rs2115347323 7 : 2,379,770 intron_variant, genic_downstream_transcript_variant EIF3B Yes
36 rs2115347308 7 : 2,379,764 intron_variant, genic_downstream_transcript_variant EIF3B Yes
37 rs2115347114 7 : 2,379,700 intron_variant, genic_downstream_transcript_variant EIF3B n/a
38 rs2115346889 7 : 2,379,607 intron_variant, genic_downstream_transcript_variant EIF3B n/a
39 rs2115346769 7 : 2,379,557 intron_variant, genic_downstream_transcript_variant EIF3B n/a
40 rs2115346620 7 : 2,379,515 intron_variant, genic_downstream_transcript_variant EIF3B n/a
41 rs2115346602 7 : 2,379,513 splice_donor_variant, genic_downstream_transcript_variant EIF3B n/a
42 rs2115346051 7 : 2,379,349 intron_variant, genic_downstream_transcript_variant EIF3B Yes
43 rs2115346014 7 : 2,379,340 intron_variant, genic_downstream_transcript_variant EIF3B Yes
44 rs2115345945 7 : 2,379,316 intron_variant, genic_downstream_transcript_variant EIF3B n/a
45 rs2115345820 7 : 2,379,282 intron_variant, genic_downstream_transcript_variant EIF3B n/a
46 rs2115345597 7 : 2,379,189 coding_sequence_variant, missense_variant, genic_downstream_transcript_variant EIF3B Yes
47 rs2115345499 7 : 2,379,154 synonymous_variant, coding_sequence_variant, genic_downstream_transcript_variant EIF3B Yes
48 rs2115345403 7 : 2,379,120 intron_variant, genic_downstream_transcript_variant EIF3B n/a
49 rs2115345325 7 : 2,379,093 intron_variant, genic_downstream_transcript_variant EIF3B n/a
50 rs2115345092 7 : 2,379,027 intron_variant, genic_downstream_transcript_variant EIF3B n/a
{ "section": "SNP", "summary": "1 - 50 of 15180", "genes": [], "retstart": 0, "pageSize": 50, "count": 15180, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gaphttps.ncbi.nlm.nih.gov80gapphegenihttps://https.ncbi.nlm.nih.gov/gaphttps://https.ncbi.nlm.nih.govhttps://https.ncbi.nlm.nih.gov/gap/phegeni/gaphttps://https.ncbi.nlm.nih.gov/gap/phegeni/phegenitrueCE8D12BC78BC1D51_2106SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap1508662 CE8D12BC78BC1D51_2106SID1NoIvT@CE8D12BC78BC1D51_2106SID
1 - 46 of 46 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
40FHS_eQTL11754949022562228122634phs000342phs000363
41FHS_eGene_leadQTLs1231562228122634phs000342phs000363
46GTEx_Adipose_Subcutaneous101137023715323phs000424.v6phs000424.v6
47GTEx_Adipose_Visceral_Omentum101123423715323phs000424.v6phs000424.v6
48GTEx_Adrenal_Gland101115923715323phs000424.v6phs000424.v6
49GTEx_Artery_Aorta101124723715323phs000424.v6phs000424.v6
50GTEx_Artery_Coronary101114123715323phs000424.v6phs000424.v6
51GTEx_Artery_Tibial101136023715323phs000424.v6phs000424.v6
52GTEx_Brain_Anterior_cingulate_cortex_BA2410119723715323phs000424.v6phs000424.v6
53GTEx_Brain_Caudate_basal_ganglia202213323715323phs000424.v6phs000424.v6
54GTEx_Brain_Cerebellar_Hemisphere101111423715323phs000424.v6phs000424.v6
55GTEx_Brain_Cerebellum101113823715323phs000424.v6phs000424.v6
56GTEx_Brain_Cortex101112723715323phs000424.v6phs000424.v6
57GTEx_Brain_Frontal_Cortex_BA9101111523715323phs000424.v6phs000424.v6
58GTEx_Brain_Hippocampus101110223715323phs000424.v6phs000424.v6
59GTEx_Brain_Hypothalamus101110323715323phs000424.v6phs000424.v6
60GTEx_Brain_Nucleus_accumbens_basal_ganglia101112423715323phs000424.v6phs000424.v6
61GTEx_Brain_Putamen_basal_ganglia101110323715323phs000424.v6phs000424.v6
62GTEx_Breast_Mammary_Tissue202221923715323phs000424.v6phs000424.v6
63GTEx_Cells_EBV-transformed_lymphocytes101113223715323phs000424.v6phs000424.v6
64GTEx_Cells_Transformed_fibroblasts101130523715323phs000424.v6phs000424.v6
65GTEx_Colon_Sigmoid101117323715323phs000424.v6phs000424.v6
66GTEx_Colon_Transverse101120723715323phs000424.v6phs000424.v6
67GTEx_Esophagus_Gastroesophageal_Junction202217523715323phs000424.v6phs000424.v6
68GTEx_Esophagus_Mucosa101132923715323phs000424.v6phs000424.v6
69GTEx_Esophagus_Muscularis202228123715323phs000424.v6phs000424.v6
70GTEx_Heart_Atrial_Appendage101121723715323phs000424.v6phs000424.v6
71GTEx_Heart_Left_Ventricle101124823715323phs000424.v6phs000424.v6
72GTEx_Liver101113823715323phs000424.v6phs000424.v6
73GTEx_Lung303333823715323phs000424.v6phs000424.v6
74GTEx_Muscle_Skeletal101145423715323phs000424.v6phs000424.v6
75GTEx_Nerve_Tibial101133323715323phs000424.v6phs000424.v6
76GTEx_Ovary101110923715323phs000424.v6phs000424.v6
77GTEx_Pancreas101119423715323phs000424.v6phs000424.v6
78GTEx_Pituitary101112423715323phs000424.v6phs000424.v6
79GTEx_Prostate101112023715323phs000424.v6phs000424.v6
80GTEx_Skin_Not_Sun_Exposed_Suprapubic101126923715323phs000424.v6phs000424.v6
81GTEx_Skin_Sun_Exposed_Lower_leg101138823715323phs000424.v6phs000424.v6
82GTEx_Small_Intestine_Terminal_Ileum101110523715323phs000424.v6phs000424.v6
83GTEx_Spleen101111923715323phs000424.v6phs000424.v6
84GTEx_Stomach101120223715323phs000424.v6phs000424.v6
85GTEx_Testis202219923715323phs000424.v6phs000424.v6
86GTEx_Thyroid101134723715323phs000424.v6phs000424.v6
87GTEx_Uterus20228923715323phs000424.v6phs000424.v6
88GTEx_Vagina10119823715323phs000424.v6phs000424.v6
89GTEx_Whole_Blood101143023715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 46 of 46"}

Get information.dbGaP Studies

No dbGaP study data found.
Modify Search { "section": "GAP", "summary": "No data found.", "retstart": 0, "pageSize": 50, "count": "" }
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