Search Summary
Search Criteria
Genotype Selection - Genes
23623
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Search Results
Association Results | No data found. | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 5213 | Searched by gene symbols retrieved from gene search. |
eQTL Data | 1 - 45 of 45 | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | No data found. | Searched by traits retrieved from page 1 of association results. |
Genome View | 1 gene over 1 chromosome. |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | RUSC1 | RUN and SH3 domain containing 1 | 1 | : 155,320,894 - 155,331,118 | 617318 | |||||
| ||||||||||
Association Results
No association data found.
Modify Search
{
"section": "assoc",
"summary": "No data found.",
"mesh": [
],
"genes": [],
"snps": [],
"page": 1,
"call": "BuildGaP",
"pageSize": 50,
"recCount": 0
}
SNPs
# | rs# | Location | Function Class | Gene | Diversity | |
---|---|---|---|---|---|---|
1 | rs2148292982 | 1 | : 155,331,548 | downstream_transcript_variant, 500B_downstream_variant | RUSC1 | Yes |
2 | rs2148292797 | 1 | : 155,331,439 | downstream_transcript_variant, 500B_downstream_variant | RUSC1 | n/a |
3 | rs2148292760 | 1 | : 155,331,416 | downstream_transcript_variant, 500B_downstream_variant | RUSC1 | Yes |
4 | rs2148292743 | 1 | : 155,331,407 | downstream_transcript_variant, 500B_downstream_variant | RUSC1 | Yes |
5 | rs2148292526 | 1 | : 155,331,248 | downstream_transcript_variant, 500B_downstream_variant | RUSC1 | n/a |
6 | rs2148292272 | 1 | : 155,331,091 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | n/a |
7 | rs2148292246 | 1 | : 155,331,066 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | Yes |
8 | rs2148292215 | 1 | : 155,331,042 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | n/a |
9 | rs2148292195 | 1 | : 155,331,027 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | Yes |
10 | rs2148292071 | 1 | : 155,330,944 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | n/a |
11 | rs2148292069 | 1 | : 155,330,943 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | Yes |
12 | rs2148291694 | 1 | : 155,330,716 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | Yes |
13 | rs2148291474 | 1 | : 155,330,604 | 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | n/a |
14 | rs2148291236 | 1 | : 155,330,541 | coding_sequence_variant, synonymous_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | Yes |
15 | rs2148290722 | 1 | : 155,330,413 | coding_sequence_variant, missense_variant, genic_downstream_transcript_variant, non_coding_transcript_variant | RUSC1 | n/a |
16 | rs2148290515 | 1 | : 155,330,337 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
17 | rs2148290457 | 1 | : 155,330,309 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
18 | rs2148290138 | 1 | : 155,330,151 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
19 | rs2148290120 | 1 | : 155,330,144 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
20 | rs2148289771 | 1 | : 155,329,985 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
21 | rs2148289572 | 1 | : 155,329,949 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
22 | rs2148289457 | 1 | : 155,329,914 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
23 | rs2148289020 | 1 | : 155,329,749 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
24 | rs2148288967 | 1 | : 155,329,723 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
25 | rs2148288922 | 1 | : 155,329,715 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
26 | rs2148288913 | 1 | : 155,329,714 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
27 | rs2148288890 | 1 | : 155,329,706 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
28 | rs2148288838 | 1 | : 155,329,678 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
29 | rs2148288604 | 1 | : 155,329,550 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
30 | rs2148288480 | 1 | : 155,329,500 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
31 | rs2148288186 | 1 | : 155,329,412 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
32 | rs2148288067 | 1 | : 155,329,386 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
33 | rs2148288040 | 1 | : 155,329,378 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
34 | rs2148288010 | 1 | : 155,329,373 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
35 | rs2148288003 | 1 | : 155,329,368 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
36 | rs2148287956 | 1 | : 155,329,343 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
37 | rs2148287899 | 1 | : 155,329,310 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
38 | rs2148287881 | 1 | : 155,329,306 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
39 | rs2148287832 | 1 | : 155,329,274 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
40 | rs2148287151 | 1 | : 155,329,000 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
41 | rs2148287125 | 1 | : 155,328,985 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
42 | rs2148286948 | 1 | : 155,328,908 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
43 | rs2148286275 | 1 | : 155,328,703 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
44 | rs2148285982 | 1 | : 155,328,578 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
45 | rs2148285887 | 1 | : 155,328,527 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
46 | rs2148285616 | 1 | : 155,328,416 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
47 | rs2148285554 | 1 | : 155,328,397 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
48 | rs2148285547 | 1 | : 155,328,396 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
49 | rs2148285516 | 1 | : 155,328,381 | intron_variant, genic_downstream_transcript_variant | RUSC1 | Yes |
50 | rs2148285420 | 1 | : 155,328,324 | intron_variant, genic_downstream_transcript_variant | RUSC1 | n/a |
eQTL Data
1 - 45 of 45
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{ "section": "eqtl", "summary": "1 - 45 of 45"}
dbGaP Studies
No dbGaP study data found.
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{
"section": "GAP",
"summary": "No data found.",
"retstart": 0,
"pageSize": 50,
"count": ""
}