Search Summary
Search Criteria
Genotype Selection - Genes
375616
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Search Results
Association Results | 1 - 13 of 13 | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 15508 | Searched by gene symbols retrieved from gene search. |
eQTL Data | 1 - 44 of 44 | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | Retrieving... | Searched by traits retrieved from association results. |
Genome View | 1 gene over 1 chromosome. |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | KCP | kielin cysteine rich BMP regulator | 7 | : 128,910,709 - 128,876,865 | 609344 | |||||
| ||||||||||
Association Results
SNPs
# | rs# | Location | Function Class | Gene | Diversity | |
---|---|---|---|---|---|---|
1 | rs2128952381 | 7 | : 128,912,691 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
2 | rs2128952374 | 7 | : 128,912,668 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
3 | rs2128952322 | 7 | : 128,912,569 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
4 | rs2128952313 | 7 | : 128,912,559 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
5 | rs2128952272 | 7 | : 128,912,444 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
6 | rs2128952259 | 7 | : 128,912,414 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
7 | rs2128952257 | 7 | : 128,912,409 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
8 | rs2128952250 | 7 | : 128,912,384 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
9 | rs2128952234 | 7 | : 128,912,335 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
10 | rs2128952228 | 7 | : 128,912,324 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
11 | rs2128952184 | 7 | : 128,912,154 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
12 | rs2128952141 | 7 | : 128,911,957 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
13 | rs2128952137 | 7 | : 128,911,940 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
14 | rs2128952133 | 7 | : 128,911,923 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
15 | rs2128952131 | 7 | : 128,911,919 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
16 | rs2128952129 | 7 | : 128,911,916 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
17 | rs2128952128 | 7 | : 128,911,904 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
18 | rs2128952126 | 7 | : 128,911,900 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
19 | rs2128952110 | 7 | : 128,911,875 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
20 | rs2128952003 | 7 | : 128,911,586 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
21 | rs2128951943 | 7 | : 128,911,384 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
22 | rs2128951936 | 7 | : 128,911,369 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
23 | rs2128951917 | 7 | : 128,911,318 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
24 | rs2128951911 | 7 | : 128,911,307 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
25 | rs2128951903 | 7 | : 128,911,274 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
26 | rs2128951895 | 7 | : 128,911,239 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
27 | rs2128951853 | 7 | : 128,911,069 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
28 | rs2128951850 | 7 | : 128,911,058 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
29 | rs2128951839 | 7 | : 128,911,012 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
30 | rs2128951837 | 7 | : 128,911,007 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
31 | rs2128951830 | 7 | : 128,910,978 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
32 | rs2128951829 | 7 | : 128,910,973 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
33 | rs2128951828 | 7 | : 128,910,970 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
34 | rs2128951810 | 7 | : 128,910,900 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
35 | rs2128951798 | 7 | : 128,910,862 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
36 | rs2128951795 | 7 | : 128,910,850 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
37 | rs2128951778 | 7 | : 128,910,821 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
38 | rs2128951753 | 7 | : 128,910,763 | upstream_transcript_variant, 2KB_upstream_variant | KCP | Yes |
39 | rs2128951741 | 7 | : 128,910,723 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
40 | rs2128951738 | 7 | : 128,910,717 | upstream_transcript_variant, 2KB_upstream_variant | KCP | n/a |
41 | rs2128951709 | 7 | : 128,910,639 | coding_sequence_variant, missense_variant | KCP | n/a |
42 | rs2128951692 | 7 | : 128,910,599 | splice_donor_variant | KCP | n/a |
43 | rs2128951684 | 7 | : 128,910,531 | intron_variant | KCP | n/a |
44 | rs2128951680 | 7 | : 128,910,515 | intron_variant | KCP | n/a |
45 | rs2128951660 | 7 | : 128,910,404 | intron_variant | KCP | n/a |
46 | rs2128951647 | 7 | : 128,910,361 | intron_variant | KCP | Yes |
47 | rs2128951613 | 7 | : 128,910,195 | intron_variant | KCP | n/a |
48 | rs2128951612 | 7 | : 128,910,185 | intron_variant | KCP | Yes |
49 | rs2128951611 | 7 | : 128,910,182 | intron_variant | KCP | n/a |
50 | rs2128951601 | 7 | : 128,910,157 | intron_variant | KCP | n/a |
eQTL Data
1 - 44 of 44
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{ "section": "eqtl", "summary": "1 - 44 of 44"}