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Items: 18

1.

Quantification of gene expression from primate tissue samples

(Submitter supplied) We have quantified gene expression in five tissues (brain, heart, kidney, liver and testis) from humans, chimpanzees and rhesus macaques using the Illumina NlaIII Digital Gene Expression (DGE) protocol. This dataset extends a previous microarray study by Khaitovich et al. (Khaitovich et al. 2005) with the rhesus macaque outgroup and complements other previously generated tissue transcriptome profiles from primates (Enard et al. more...
Organism:
Pan troglodytes; Macaca mulatta; Homo sapiens
Type:
Expression profiling by high throughput sequencing
6 related Platforms
71 Samples
Download data: TSV
Series
Accession:
GSE50782
ID:
200050782
2.

Phyloepigenetic comparison of apes

(Submitter supplied) We have determined methylation state differences in the epigenomes of neutrophils purified from human and chimpanzee. We used deep sequencing of ends generated by digestion with a methylation-sensitive restriction enzyme, followed by analysis with the MetMap computational pipeline to infer methylation states from the sequencing data. Using the orangutan as an outgroup, analysis of DNA sequence substitutions in CG-dense regions that are either methylated or unmethylated in all three species indicates that methylation states in the neutrophil reflect methylation states in the germline. more...
Organism:
Pan troglodytes; Pongo pygmaeus; Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platforms:
GPL10548 GPL10547 GPL9052
11 Samples
Download data: TXT, WIG
Series
Accession:
GSE22376
ID:
200022376
3.

Illumina Genome Analyzer (Pan troglodytes)

Organism:
Pan troglodytes
2 Series
15 Samples
Download data
Platform
Accession:
GPL10547
ID:
100010547
4.

cL5

Organism:
Pan troglodytes
Source name:
Big Male Zurich
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229097
ID:
301229097
5.

cL4

Organism:
Pan troglodytes
Source name:
Koos
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229096
ID:
301229096
6.

cL3

Organism:
Pan troglodytes
Source name:
Japie
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229095
ID:
301229095
7.

cL2

Organism:
Pan troglodytes
Source name:
Herman
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229094
ID:
301229094
8.

cL1

Organism:
Pan troglodytes
Source name:
Antoine
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229093
ID:
301229093
9.

cB5

Organism:
Pan troglodytes
Source name:
Big Male Zurich
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229084
ID:
301229084
10.

cB4

Organism:
Pan troglodytes
Source name:
Koos
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229083
ID:
301229083
11.

cB3

Organism:
Pan troglodytes
Source name:
Japie
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229082
ID:
301229082
12.

cB2

Organism:
Pan troglodytes
Source name:
Herman
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229081
ID:
301229081
13.

cB1

Organism:
Pan troglodytes
Source name:
Antoine
Platform:
GPL10547
Series:
GSE50782
Download data
Sample
Accession:
GSM1229080
ID:
301229080
14.

chimp_1_MspI

Organism:
Pan troglodytes
Source name:
whole blood
Platform:
GPL10547
Series:
GSE22376
Download data: TXT
Sample
Accession:
GSM770501
ID:
300770501
15.

chimp_4

Organism:
Pan troglodytes
Source name:
whole blood
Platform:
GPL10547
Series:
GSE22376
Download data: TXT, WIG
Sample
Accession:
GSM556674
ID:
300556674
16.

chimp_3

Organism:
Pan troglodytes
Source name:
whole blood
Platform:
GPL10547
Series:
GSE22376
Download data: TXT, WIG
Sample
Accession:
GSM556673
ID:
300556673
17.

chimp_2

Organism:
Pan troglodytes
Source name:
whole blood
Platform:
GPL10547
Series:
GSE22376
Download data: TXT, WIG
Sample
Accession:
GSM556672
ID:
300556672
18.

chimp_1

Organism:
Pan troglodytes
Source name:
whole blood
Platform:
GPL10547
Series:
GSE22376
Download data: TXT, WIG
Sample
Accession:
GSM556671
ID:
300556671
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