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Items: 5

1.

Dual RNA-seq of zebrafish larvae infected with Shigella sonnei

(Submitter supplied) Shigella flexneri is historically regarded as the primary agent of bacillary dysentery, yet the closely-related Shigella sonnei is replacing S. flexneri, especially in developing countries. The underlying reasons for this dramatic shift are mostly unknown. Using a zebrafish (Danio rerio) model of Shigella infection, we discover that S. sonnei is more virulent than S. flexneri in vivo. Whole animal dual-RNAseq and testing of bacterial mutants suggest that S. more...
Organism:
Shigella sonnei; Danio rerio
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL20828 GPL27764 GPL27763
9 Samples
Download data: TSV
Series
Accession:
GSE140544
ID:
200140544
2.

Illumina NextSeq 500 (Shigella sonnei)

Organism:
Shigella sonnei
1 Series
3 Samples
Download data
Platform
Accession:
GPL27764
ID:
100027764
3.

Control S. sonnei culture 3

Organism:
Shigella sonnei
Source name:
S. sonnei culture
Platform:
GPL27764
Series:
GSE140544
Download data
Sample
Accession:
GSM4173983
ID:
304173983
4.

Control S. sonnei culture 2

Organism:
Shigella sonnei
Source name:
S. sonnei culture
Platform:
GPL27764
Series:
GSE140544
Download data
Sample
Accession:
GSM4173980
ID:
304173980
5.

Control S. sonnei culture 1

Organism:
Shigella sonnei
Source name:
S. sonnei culture
Platform:
GPL27764
Series:
GSE140544
Download data
Sample
Accession:
GSM4173977
ID:
304173977
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