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Items: 12

1.

Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome

(Submitter supplied) In dinoflagellates, the most unique and divergent nuclear organization among the known diversity of eukaryotes has evolved. The list of highly unusual features of dinoflagellate nuclei and genomes is long -- permanently condensed liquid crystalline chromosomes, in which histones are not the main packaging component, genes organized as very long unidirectional gene arrays, general absence of transcriptional regulation, high abundance of the otherwise very rare DNA modification 5-hydroxymethyluracil (5-hmU), and many others. more...
Organism:
Candida albicans; Homo sapiens; Bigelowiella natans; Breviolum minutum; Saccharomyces cerevisiae
Type:
Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other
4 related Platforms
34 Samples
Download data: BEDGRAPH, BIGWIG
Series
Accession:
GSE241969
ID:
200241969
2.

The chromatin organization of a chlorarachniophyte nucleomorph genome

(Submitter supplied) Nucleomoprhs are remnants of secondary endosymbiotic events between two eukaryote cells wherein the endosymbiont has retained its eukaryotic nucleus. Nucleomoprhs have evolved at least twice independently, in chlorarachniophytes and cryptophytes, yet they have converged on a remarkably similar genomic architecture, characterized by the most extreme compression and minituarization among all known eukaryotes. more...
Organism:
Bigelowiella natans
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL30494
5 Samples
Download data: BIGWIG, HIC
Series
Accession:
GSE181751
ID:
200181751
3.

NextSeq 550 (Bigelowiella natans)

Organism:
Bigelowiella natans
2 Series
9 Samples
Download data
Platform
Accession:
GPL30494
ID:
100030494
4.

L506-34C-ATAC-rep2

Organism:
Bigelowiella natans
Source name:
L506-34C-ATAC-rep2
Platform:
GPL30494
Series:
GSE241969
Download data: BIGWIG
Sample
Accession:
GSM7746902
ID:
307746902
5.

L505-34C-ATAC-rep1

Organism:
Bigelowiella natans
Source name:
L505-34C-ATAC-rep1
Platform:
GPL30494
Series:
GSE241969
Download data: BIGWIG
Sample
Accession:
GSM7746901
ID:
307746901
6.

L504-27C-ATAC-rep2

Organism:
Bigelowiella natans
Source name:
L504-27C-ATAC-rep2
Platform:
GPL30494
Series:
GSE241969
Download data: BIGWIG
Sample
Accession:
GSM7746900
ID:
307746900
7.

L503-27C-ATAC-rep1

Organism:
Bigelowiella natans
Source name:
L503-27C-ATAC-rep1
Platform:
GPL30494
Series:
GSE241969
Download data: BIGWIG
Sample
Accession:
GSM7746899
ID:
307746899
8.

Bigelowiella_natans_KAS_rep2

Organism:
Bigelowiella natans
Source name:
Bigelowiella_natans_KAS_rep2
Platform:
GPL30494
Series:
GSE181751
Download data: BIGWIG
Sample
Accession:
GSM5510382
ID:
305510382
9.

Bigelowiella_natans_KAS_rep1

Organism:
Bigelowiella natans
Source name:
Bigelowiella_natans_KAS_rep1
Platform:
GPL30494
Series:
GSE181751
Download data: BIGWIG
Sample
Accession:
GSM5510381
ID:
305510381
10.

Bigelowiella_natans_ATAC_rep2

Organism:
Bigelowiella natans
Source name:
Bigelowiella_natans_ATAC_rep2
Platform:
GPL30494
Series:
GSE181751
Download data: BIGWIG
Sample
Accession:
GSM5510380
ID:
305510380
11.

Bigelowiella_natans_ATAC_rep1

Organism:
Bigelowiella natans
Source name:
Bigelowiella_natans_ATAC_rep1
Platform:
GPL30494
Series:
GSE181751
Download data: BIGWIG
Sample
Accession:
GSM5510379
ID:
305510379
12.

Bigelowiella_natans_Hi-C

Organism:
Bigelowiella natans
Source name:
Bigelowiella_natans_Hi-C
Platform:
GPL30494
Series:
GSE181751
Download data: HIC
Sample
Accession:
GSM5510378
ID:
305510378
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Supplemental Content

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