GPL6852[Accession] - GEO DataSets - NCBI

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Select item 2000114321.

Direct transcriptional targets of the HHV 8/KSHV Rta Lytic Switch Protein

(Submitter supplied) Lytic reactivation from latency is critical for the pathogenesis of KSHV. We previously demonstrated that the 691 amino acid KSHV Rta transcriptional transactivator is necessary and sufficient to reactivate the virus from latency. Viral lytic cycle genes, including those expressing additional transactivators and putative oncogenes, are induced in a cascade fashion following Rta expression. In this study, we sought to define Rta’s direct targets during reactivation by generating a conditionally nuclear variant of Rta. more...

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Type:: Expression profiling by array

Platform:: GPL6852
36 Samples

Series

Accession:: GSE11432

ID:: 200011432

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000068522.

UMDNJ/Lukac Human herpesvirus 8/107+GAPDH

(Submitter supplied) The KSHV microarray consists of 60-70-mer oligonucleotides (oligos) designed to detect 96 predicted KSHV ORFs and splice variants, identical to those published by Lu, et al (Journal of Virology, December 2004, p. 13637-13652, Vol. 78, No. 24), updated to include newer annotated transcripts. A detector oligo for the Human housekeeping genes glyceraldehyde-3-phosphate dehydrogenase was also synthesized. more...

Organism:: Human gammaherpesvirus 8

1 Series
36 Samples

Platform

Accession:: GPL6852

ID:: 100006852

Select item 3002883933.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample4-Repl-3

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample4-Repl-3 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample4-Repl-3 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288393

ID:: 300288393

Select item 3002883924.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample4-Repl-2

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample4-Repl-2 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample4-Repl-2 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288392

ID:: 300288392

Select item 3002883915.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample4-Repl-1

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample4-Repl-1 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample4-Repl-1 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288391

ID:: 300288391

Select item 3002883906.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample2B-Repl-3

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample2B-Repl-3 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample2B-Repl-3 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288390

ID:: 300288390

Select item 3002883897.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample2B-Repl-2

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample2B-Repl-2 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample2B-Repl-2 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288389

ID:: 300288389

Select item 3002883888.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample2B-Repl-1

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample2B-Repl-1 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample2B-Repl-1 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288388

ID:: 300288388

Select item 3002883839.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample5-Repl-3

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample5-Repl-3 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample5-Repl-3 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288383

ID:: 300288383

Select item 30028838210.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample5-Repl-2

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample5-Repl-2 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample5-Repl-2 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288382

ID:: 300288382

Select item 30028838011.

RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample5-Repl-1

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample5-Repl-1 (channel 1) RTAdeltaNLS1,2-ER-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample5-Repl-1 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288380

ID:: 300288380

Select item 30028837812.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample5-Repl-3

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample5-Repl-3 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample5-Repl-3 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288378

ID:: 300288378

Select item 30028837713.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample5-Repl-2

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample5-Repl-2 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample5-Repl-2 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288377

ID:: 300288377

Select item 30028837614.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample5-Repl-1

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample5-Repl-1 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample5-Repl-1 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288376

ID:: 300288376

Select item 30028837515.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample2B-Repl-3

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample2B-Repl-3 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample2B-Repl-3 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288375

ID:: 300288375

Select item 30028837416.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample2B-Repl-2

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample2B-Repl-2 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample2B-Repl-2 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288374

ID:: 300288374

Select item 30028837317.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample2B-Repl-1

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample2B-Repl-1 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample2B-Repl-1 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288373

ID:: 300288373

Select item 30028837118.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample4-Repl-3

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample4-Repl-3 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample4-Repl-3 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288371

ID:: 300288371

Select item 30028837019.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample4-Repl-2

Organism:: Human gammaherpesvirus 8; Chlorocebus aethiops

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample4-Repl-2 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample4-Repl-2 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288370

ID:: 300288370

Select item 30028836920.

VectorTransfected-Vero-rKSHV.219cells-Hygro-Plus/Minus4-OHT-Sample4-Repl-1

Organism:: Chlorocebus aethiops; Human gammaherpesvirus 8

Source name:: Vector-Transfected-Vero-rKSHV.219cells-Hygro-Plus 4-OHT-Sample4-Repl-1 (channel 1) Vector-Transfected-Vero-rKSHV.219cells-Hygro-Minus 4-OHT-Sample4-Repl-1 (channel 2)

Platform:: GPL6852
Series:: GSE11432

Sample

Accession:: GSM288369

ID:: 300288369

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