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Items: 1 to 20 of 64

1.

Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (ChIP-Seq)

(Submitter supplied) The genomes of mammalian neurons contain uniquely high levels of non-CG DNA methylation that can be bound by the Rett syndrome protein, MeCP2, to regulate gene expression. How patterns of non-CG methylation at genes are established and the mechanism by which this methylation works with MeCP2 to control gene expression is unclear. Here we find that genes repressed by MeCP2 are found within regions of high non-CG methylation that are defined by domains of chromatin folding. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL21493
62 Samples
Download data: TSV
Series
Accession:
GSE123371
ID:
200123371
2.

Illumina HiSeq 3000 (Mus musculus)

Platform
Accession:
GPL21493
ID:
100021493
3.

Dnmt3a_Input_cKO4

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114284
ID:
304114284
4.

Dnmt3a_Input_WT4

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114283
ID:
304114283
5.

Dnmt3a_Input_cKO2

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114282
ID:
304114282
6.

Dnmt3a_Input_WT2

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114281
ID:
304114281
7.

Dnmt3a_H3K27ac_cKO9

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114280
ID:
304114280
8.

Dnmt3a_H3K27ac_WT9

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114279
ID:
304114279
9.

Dnmt3a_H3K27ac_cKO4

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114278
ID:
304114278
10.

Dnmt3a_H3K27ac_WT4

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114277
ID:
304114277
11.

Dnmt3a_H3K27ac_cKO3

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114276
ID:
304114276
12.

Dnmt3a_H3K27ac_WT7

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114275
ID:
304114275
13.

Dnmt3a_H3K27ac_cKO2

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114274
ID:
304114274
14.

Dnmt3a_H3K27ac_WT2

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114273
ID:
304114273
15.

Dnmt3a_H3K27ac_cKO_4755

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114272
ID:
304114272
16.

Dnmt3a_H3K27ac_WT_4862

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM4114271
ID:
304114271
17.

WTTG_Input_Tg3

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM3502312
ID:
303502312
18.

WTTG_Input_WT3

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM3502311
ID:
303502311
19.

WTTG_H3K4me3_Tg3

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM3502310
ID:
303502310
20.

WTTG_H3K4me3_WT3

Organism:
Mus musculus
Source name:
Cortex
Platform:
GPL21493
Series:
GSE123371 GSE123373
Download data
Sample
Accession:
GSM3502309
ID:
303502309
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Supplemental Content

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