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Items: 1 to 20 of 70

1.

Genomic profiling of chondrosarcoma: chromosomal patterns in central and peripheral tumors (BAC/CGH)

(Submitter supplied) DNA copy number analysis of 67 fresh frozen chondrosarcoma biopsies using 32k BAC and 244k oligo array CGH. Genomic imbalances, in most tumors affecting large regions of the genome, were found in 90% of the cases. Although rare, recurrent amplifications were found at 8q24.21-q24.22 and 11q22.1-q22.3, and homozygous deletions of loci previously implicated in chondrosarcoma development affected the CDKN2A, EXT1 and EXT2 genes. more...
Organism:
Homo sapiens
Type:
Genome variation profiling by array
Platforms:
GPL7203 GPL4723
67 Samples
Download data: GPR, TXT
Series
Accession:
GSE12439
ID:
200012439
2.

LUH Human Genome CGH Microarray 244A

(Submitter supplied) This microarray is Agilent’s premium product for human DNA copy-number profiling. Over 236,000 60-mer oligonucleotide probes, specifically optimized for copy-number measurement, span coding and non-coding genomic sequences with median spacing of 7.4 kb and 16.5 kb respectively. This microarray is designed for use with Agilent’s optimized assay protocols, enabling researchers to use nanogram levels of total genomic DNA without complexity reduction. more...
Organism:
Homo sapiens
2 Series
5 Samples
Download data
Platform
Accession:
GPL7203
ID:
100007203
3.

SWEGENE_BAC_32K_Full

(Submitter supplied) The 32k BAC Re-Array set Ver. 1.0 (32,433 BAC clones) was obtained from the BACPAC Resource Center at Children's Hospital Oakland Research Institute, Oakland (CA, US). The average resolution of the whole genome tiling clone set is 46kb. Clones were mapped to human genome build 17 (UCSC Human Genome Browser) Protocol: Arrays were produced using amplified genomic DNA from BAC clones. Amplification was performed using degenerate oligonucleotide primed PCR and products were purified by size-exclusion filtration and verified by agarose gel electrophoresis. more...
Organism:
Homo sapiens
22 Series
1274 Samples
Download data
Platform
Accession:
GPL4723
ID:
100004723
4.

Chondrosarcoma_case_66

Organism:
Homo sapiens
Source name:
Case 66 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312404
ID:
300312404
5.

Chondrosarcoma_case_65

Organism:
Homo sapiens
Source name:
Case 65 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312403
ID:
300312403
6.

Chondrosarcoma_case_64

Organism:
Homo sapiens
Source name:
Case 64 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312402
ID:
300312402
7.

Chondrosarcoma_case_63

Organism:
Homo sapiens
Source name:
Case 63 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312401
ID:
300312401
8.

Chondrosarcoma_case_62

Organism:
Homo sapiens
Source name:
Case 62 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312400
ID:
300312400
9.

Chondrosarcoma_case_61

Organism:
Homo sapiens
Source name:
Case 61 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312399
ID:
300312399
10.

Chondrosarcoma_case_60

Organism:
Homo sapiens
Source name:
Case 60 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312398
ID:
300312398
11.

Chondrosarcoma_case_59

Organism:
Homo sapiens
Source name:
Case 59 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312397
ID:
300312397
12.

Chondrosarcoma_case_58

Organism:
Homo sapiens
Source name:
Case 58 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312396
ID:
300312396
13.

Chondrosarcoma_case_57

Organism:
Homo sapiens
Source name:
Case 57 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312395
ID:
300312395
14.

Chondrosarcoma_case_56

Organism:
Homo sapiens
Source name:
Case 56 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312394
ID:
300312394
15.

Chondrosarcoma_case_55

Organism:
Homo sapiens
Source name:
Case 55 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312393
ID:
300312393
16.

Chondrosarcoma_case_54

Organism:
Homo sapiens
Source name:
Case 54 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312392
ID:
300312392
17.

Chondrosarcoma_case_53

Organism:
Homo sapiens
Source name:
Case 53 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312391
ID:
300312391
18.

Chondrosarcoma_case_52

Organism:
Homo sapiens
Source name:
Case 52 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312390
ID:
300312390
19.

Chondrosarcoma_case_51

Organism:
Homo sapiens
Source name:
Case 51 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312389
ID:
300312389
20.

Chondrosarcoma_case_50

Organism:
Homo sapiens
Source name:
Case 50 (channel 1) Promega reference male DNA (Promega, Madison, WI, USA) (channel 2)
Platform:
GPL4723
Series:
GSE12439 GSE12532
Download data: GPR
Sample
Accession:
GSM312388
ID:
300312388
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