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Items: 8

1.

Linker histones mediate sequence-specific regulation of chromosomal organization and H3K27me3 enrichment over genes and telomeric repeats (ChIP-Seq)

(Submitter supplied) Chromatin architecture relies on histone H1 whose central globular domain (GH1) sits on the nucleosome dyad and carboxy-terminal domain associates with linker DNA. We report that Arabidopsis H1 positively influences H3K27me3 chromatin enrichment over protein-coding genes but oppositely prevents its accumulation on telomeres and heterochromatic Interstitial Telomeric Repeats (ITRs). Contrasting with their neighboring heterochromatic environment, pericentromeric ITR regions remain highly compacted and are more prone to long-distance interactions with telomeres in H1 mutant plants. more...
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL19580
6 Samples
Download data: BIGWIG
Series
Accession:
GSE160411
ID:
200160411
2.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
392 Series
9008 Samples
Download data
Platform
Accession:
GPL19580
ID:
100019580
3.

IP_H3

Organism:
Arabidopsis thaliana
Source name:
5-day-old Arabidopsis seedlings
Platform:
GPL19580
Series:
GSE160411 GSE160414
Download data: BIGWIG
Sample
Accession:
GSM4873056
ID:
304873056
4.

IP_H1.2-GFP_rep3

Organism:
Arabidopsis thaliana
Source name:
5-day-old Arabidopsis seedlings
Platform:
GPL19580
Series:
GSE160411 GSE160414
Download data: BIGWIG
Sample
Accession:
GSM4873055
ID:
304873055
5.

IP_H1.2-GFP_rep2

Organism:
Arabidopsis thaliana
Source name:
5-day-old Arabidopsis seedlings
Platform:
GPL19580
Series:
GSE160411 GSE160414
Download data: BIGWIG
Sample
Accession:
GSM4873054
ID:
304873054
6.

IP_H1.2-GFP_rep1

Organism:
Arabidopsis thaliana
Source name:
5-day-old Arabidopsis seedlings
Platform:
GPL19580
Series:
GSE160411 GSE160414
Download data: BIGWIG
Sample
Accession:
GSM4873053
ID:
304873053
7.

input_H1.2-GFP_rep2

Organism:
Arabidopsis thaliana
Source name:
5-day-old Arabidopsis seedlings
Platform:
GPL19580
Series:
GSE160411 GSE160414
Download data: BIGWIG
Sample
Accession:
GSM4873052
ID:
304873052
8.

input_H1.2-GFP_rep1

Organism:
Arabidopsis thaliana
Source name:
5-day-old Arabidopsis seedlings
Platform:
GPL19580
Series:
GSE160411 GSE160414
Download data: BIGWIG
Sample
Accession:
GSM4873051
ID:
304873051
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Supplemental Content

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