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Items: 10

1.

AGO4 slicer activity reveals the passenger strand function of plant 23 nt siRNAs and the post-slicing retention of target RNAs mediating RNA-directed DNA methylation [WGBS]

(Submitter supplied) In plants, transcriptional silencing by RNA-directed DNA methylation (RdDM) is mediated by ARGONAUTE 4 (AGO4) and 24 nt short-interfering RNAs (siRNAs) that are generated in parallel with 23 nt RNAs of unknown function. We show that 23 nt RNAs serve as the passenger strands of 23/24 nt duplexes loaded into AGO4. The 24 nt siRNAs then guide AGO4 slicing of the passenger strands, generating 11 and 12 nt cleavage products. more...
Organism:
Arabidopsis thaliana
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL19580
8 Samples
Download data: TXT
Series
Accession:
GSE201234
ID:
200201234
2.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
390 Series
8865 Samples
Download data
Platform
Accession:
GPL19580
ID:
100019580
3.

WGBS, Ws, biol rep 2

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053241
ID:
306053241
4.

WGBS, Ws, biol rep 1

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053240
ID:
306053240
5.

WGBS, ago4-4/AGO4, biol rep 2

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053239
ID:
306053239
6.

WGBS, ago4-4/AGO4, biol rep 1

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053238
ID:
306053238
7.

WGBS, ago4-4/AGO4-D742A, biol rep 2

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053237
ID:
306053237
8.

WGBS, ago4-4/AGO4-D742A, biol rep 1

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053236
ID:
306053236
9.

WGBS, ago4-4, biol rep 2

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053235
ID:
306053235
10.

WGBS, ago4-4, biol rep 1

Organism:
Arabidopsis thaliana
Source name:
Inflorescence
Platform:
GPL19580
Series:
GSE201234 GSE201235
Download data: TXT
Sample
Accession:
GSM6053234
ID:
306053234
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Supplemental Content

db=gds|term=GSE201234[Accession]|query=1|qty=2|blobid=MCID_664834a53844a3792a2f62fe|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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