GSE21968[Accession] - GEO DataSets

Select item 2000219681.

Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function

(Submitter supplied) H-NS family proteins are known as a member of nucleoid associated proteins (NAPs) conserved in genus Pseudomonas bacteria. Incompatibility group (Inc) P-7 archetype plasmid pCAR1 is transmissible among various Pseudomonas strains and carries genes encoding H-NS family protein, Pmr. P. putida KT2440 is one of pCAR1 hosts, which possesses five genes encoding H-NS family proteins, PP_1366 (TurA), PP_3765 (TurB), PP_0017 (TurC), PP_3693 (TurD), and PP_2947 (TurE) on its chromosome. more...

Organism:: Pseudomonas putida KT2440; Pseudomonas; Pseudomonas putida

Type:: Genome binding/occupancy profiling by genome tiling array; Expression profiling by genome tiling array

Platforms:: GPL8296 GPL6591
6 Samples

Download data: BAR, BED, CEL

Series

Accession:: GSE21968

ID:: 200021968

PubMed Full text in PMC Similar studies

Select item 1000082962.

[KT2440b520511F] Pseudomonas putida KT2440 chromosome Array

(Submitter supplied) This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FF-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FR-3.bpmap represents the reverse strand of KT2440 chromosome. Protocol: See manufacturer's web site.

Organism:: Pseudomonas putida KT2440

11 Series
74 Samples

Download data: BPMAP

Platform

Accession:: GPL8296

ID:: 100008296

Select item 1000065913.

[pCAR1_8b520435F] Affymetrix CustomExpress IncP-7 plasmid pCAR1 Tiling Array

(Submitter supplied) This is an Affymetrix custom-commercial tiling array that covers the IncP-7 plasmid pCAR1 (RefSeq: NC_004444) at 9-bp density. BPMAP files are provided as supplementary files. pCAR1_8b520435FF-3.bpmap represents the forward strand of pCAR1, and pCAR1_8b520435FR-3.bpmap represents the reverse strand of pCAR1. Protocol: See manufacturer's web site.