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Items: 14

1.

A SNF2 protein targets variable copy number repeats and thereby influences allele-specific expression

(Submitter supplied) ATRX is an X-linked gene of the SWI/SNF family whose role in vivo is currently unknown. Mutations in ATRX cause syndromal mental retardation. ATRX binds to tandem repeat (TR) sequences both in heterochromatin (e.g. telomeres) and euchromatin. Genes associated with these TRs can be dysregulated when ATRX is mutated and the degree to which their expression changes is determined by the size of the TR, producing skewed allelic expression. more...
Organism:
Homo sapiens; Mus musculus
Type:
Genome binding/occupancy profiling by array; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9185 GPL10485 GPL9052
10 Samples
Download data: BED, SAM, TXT
Series
Accession:
GSE22162
ID:
200022162

PubMed Similar studies Analyze with GEO2RSRA Run Selector

2.

Dunham lab Human 16p Array H300A

(Submitter supplied) 1kb PCR products spotted on to glass slides.
Organism:
Homo sapiens
1 Series
6 Samples
Download data
Platform
Accession:
GPL10485
ID:
100010485

3.

Illumina Genome Analyzer (Mus musculus)

Organism:
Mus musculus
554 Series
3778 Samples
Download data
Platform
Accession:
GPL9185
ID:
100009185

4.

Illumina Genome Analyzer (Homo sapiens)

Organism:
Homo sapiens
587 Series
7908 Samples
Download data
Platform
Accession:
GPL9052
ID:
100009052

5.

ATRX_Mouse_ES_Input

Organism:
Mus musculus
Source name:
Mouse Embryonic Stem Cells
Platform:
GPL9185
Series:
GSE22162
Download data: SAM
Sample
Accession:
GSM639380
ID:
300639380

SRA Run Selector

6.

ATRX_Mouse_ES_ChIPseq

Organism:
Mus musculus
Source name:
Mouse Embryonic Stem Cells
Platform:
GPL9185
Series:
GSE22162
Download data: SAM, TXT
Sample
Accession:
GSM551138
ID:
300551138

SRA Run Selector

7.

ATRX_Human_Erythroid_Input

Organism:
Homo sapiens
Source name:
Human Cultured Primary Erythroblasts
Platform:
GPL9052
Series:
GSE22162
Download data: BED
Sample
Accession:
GSM551137
ID:
300551137

SRA Run Selector

8.

ATRX_Human_Erythroid_CHIPseq

Organism:
Homo sapiens
Source name:
Human Cultured Primary Erythroblasts
Platform:
GPL9052
Series:
GSE22162
Download data: BED, TXT
Sample
Accession:
GSM551136
ID:
300551136

SRA Run Selector

9.

ATRX_ChIP_H300_Fibro

Organism:
Homo sapiens
Source name:
Cultured Primary Fibroblasts (channel 1) Cultured Primary Fibroblasts (channel 2)
Platform:
GPL10485
Series:
GSE22162
Download data: TXT
Sample
Accession:
GSM551135
ID:
300551135

10.

ATRX_ChIP_H300_Hep3b

Organism:
Homo sapiens
Source name:
Heb3b cell line (channel 1) Heb3b cell line (channel 2)
Platform:
GPL10485
Series:
GSE22162
Download data: TXT
Sample
Accession:
GSM551134
ID:
300551134

11.

figS4_H300a

Organism:
Homo sapiens
Source name:
Cultured Primary Human Erythroblasts (channel 1) Cultured Primary Human Erythroblasts (channel 2)
Platform:
GPL10485
Series:
GSE22162
Download data: TXT
Sample
Accession:
GSM551133
ID:
300551133

12.

FigS4-H300d

Organism:
Homo sapiens
Source name:
Cultured Primary Human Erythroblasts (channel 1) Cultured Primary Human Erythroblasts (channel 2)
Platform:
GPL10485
Series:
GSE22162
Download data: TXT
Sample
Accession:
GSM551132
ID:
300551132

13.

ATRX_29-1-7_rep1

Organism:
Homo sapiens
Source name:
Cultured Primary Human Erythroblasts (channel 1) Cultured Primary Human Erythroblasts (channel 2)
Platform:
GPL10485
Series:
GSE22162
Download data: TXT
Sample
Accession:
GSM551131
ID:
300551131

14.

FigS4_H300b

Organism:
Homo sapiens
Source name:
Cultured Primary Human Erythroblasts (channel 1) Cultured Primary Human Erythroblasts (channel 2)
Platform:
GPL10485
Series:
GSE22162
Download data: TXT
Sample
Accession:
GSM551130
ID:
300551130

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