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Items: 1 to 20 of 65

1.

TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions

(Submitter supplied) Surprisingly few pathways signal between cells, raising questions about mechanisms for tissue-specific responses. In particular, Wnt ligands signal in many mammalian tissues, including the intestinal epithelium, where constitutive signaling causes cancer. Genome-wide analysis of DNA cis-regulatory regions bound by the intestine-restricted transcription factor CDX2 in colonic cells uncovered highly significant over-representation of sequences that bind TCF4, a transcriptional effector of intestinal Wnt signaling. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by genome tiling array; Expression profiling by array
8 related Platforms
56 Samples
Download data: BAR, CEL, TXT
Series
Accession:
GSE22572
ID:
200022572
2.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 06, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site Complete coverage of the Human Genome U133 Set plus 6,500 additional genes for analysis of over 47,000 transcripts All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. more...
Organism:
Homo sapiens
602 DataSets
5651 Series
61 Related Platforms
171341 Samples
Download data
Platform
Accession:
GPL570
ID:
100000570
3.

[Hs35b_P07R] Affymetrix Human Tiling 2.0R Set, Array 7

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
31 Series
398 Samples
Download data
Platform
Accession:
GPL4916
ID:
100004916
4.

[Hs35b_P06R] Affymetrix Human Tiling 2.0R Set, Array 6

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
36 Series
420 Samples
Download data
Platform
Accession:
GPL4915
ID:
100004915
5.

[Hs35b_P05R] Affymetrix Human Tiling 2.0R Set, Array 5

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
33 Series
677 Samples
Download data
Platform
Accession:
GPL4914
ID:
100004914
6.

[Hs35b_P04R] Affymetrix Human Tiling 2.0R Set, Array 4

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
33 Series
310 Samples
Download data
Platform
Accession:
GPL4913
ID:
100004913
7.

[Hs35b_P03R] Affymetrix Human Tiling 2.0R Set, Array 3

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
33 Series
272 Samples
Download data
Platform
Accession:
GPL4912
ID:
100004912
8.

[Hs35b_P02R] Affymetrix Human Tiling 2.0R Set, Array 2

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
30 Series
407 Samples
Download data
Platform
Accession:
GPL4911
ID:
100004911
9.

[Hs35b_P01R] Affymetrix Human Tiling 2.0R Set, Array 1

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 2.0R Array Set is designed for chromatin immunoprecipitation (ChIP) experiments. This set of seven arrays contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 6.5 million perfect match probes to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
36 Series
333 Samples
Download data
Platform
Accession:
GPL4910
ID:
100004910
10.

shCDX2-2b

Organism:
Homo sapiens
Source name:
CDX2 knockdown in Caco-2 cells
Platform:
GPL570
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM564448
ID:
300564448
11.

shGFP2

Organism:
Homo sapiens
Source name:
shGFP control
Platform:
GPL570
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM564447
ID:
300564447
12.

shCDX2-4

Organism:
Homo sapiens
Source name:
CDX2 knockdown in Caco-2 cells
Platform:
GPL570
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM564446
ID:
300564446
13.

shCDX2-2

Organism:
Homo sapiens
Source name:
CDX2 knockdown in Caco-2 cells
Platform:
GPL570
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM564445
ID:
300564445
14.

shGFP1

Organism:
Homo sapiens
Source name:
shGFP control
Platform:
GPL570
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM564444
ID:
300564444
15.

IgG control CHIP in CaCo2 array E Rep 3

Organism:
Homo sapiens
Source name:
IgG control CHIP in CaCo2 array E
Platform:
GPL4914
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM560257
ID:
300560257
16.

IgG control CHIP in CaCo2 array E Rep 2

Organism:
Homo sapiens
Source name:
IgG control CHIP in CaCo2 array E
Platform:
GPL4914
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM560256
ID:
300560256
17.

IgG control CHIP in CaCo2 array E Rep 1

Organism:
Homo sapiens
Source name:
IgG control CHIP in CaCo2 array E
Platform:
GPL4914
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM560255
ID:
300560255
18.

CDX2 ChIP-chip in CaCo2 Array E Rep 3

Organism:
Homo sapiens
Source name:
CDX2 ChIP-chip CaCo2 Array E
Platform:
GPL4914
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM560230
ID:
300560230
19.

CDX2 ChIP-chip in CaCo2 Array E Rep 2

Organism:
Homo sapiens
Source name:
CDX2 ChIP-chip CaCo2 Array E
Platform:
GPL4914
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM560229
ID:
300560229
20.

CDX2 ChIP-chip in CaCo2 Array E Rep 1

Organism:
Homo sapiens
Source name:
CDX2 ChIP-chip CaCo2 Array E
Platform:
GPL4914
Series:
GSE22572
Download data: CEL
Sample
Accession:
GSM560228
ID:
300560228
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