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Items: 8

1.

Genome-wide expression analysis in kyp and cmt3 mutants of Arabidopsis thaliana

(Submitter supplied) Investigation of genome-wide expression in the mutant of histone H3K9 methyltransferase KRYPTONITE (KYP) or DNA methyltransferase CHROMOMETHYLASE3 (CMT3) in Arabidopsis. These mutants showed decrease in H3K9 methylation and DNA methylation levels, and transcriptional activation at transposons and repeats. Using NimbleGen DNA microarray, global pattern of expression of genes and transposons were examined in these mutants.
Organism:
Arabidopsis thaliana
Type:
Expression profiling by array
Platform:
GPL10689
6 Samples
Download data: CALLS, PAIR
Series
Accession:
GSE22957
ID:
200022957

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

NimbleGen Arabidopsis thaliana 4x72K Array

(Submitter supplied) Gene Expression array Format: 4x72K Source: TAIR Build: 6.0 Probe Length: 60mer Design Name: ATH6 60mer expr X4 Genes: 30,361 Probes/ Target: 2 Replicates: 1 FEAT_TYPE: transcript The Platform data table reflects a condensed, gene-level representation of the array. NimbleGen description files linked below: ATH6_60mer_expr.ndf ATH6_60mer_expr.ngd Protocol: see manufacturer's web site www.nimblegen.com
Organism:
Arabidopsis thaliana
8 Series
42 Samples
Download data: NDF, NGD
Platform
Accession:
GPL10689
ID:
100010689

3.

cmt3_2

Organism:
Arabidopsis thaliana
Source name:
cmt3
Platform:
GPL10689
Series:
GSE22957 GSE23030
Download data: CALLS, PAIR
Sample
Accession:
GSM566759
ID:
300566759

4.

cmt3_1

Organism:
Arabidopsis thaliana
Source name:
cmt3
Platform:
GPL10689
Series:
GSE22957 GSE23030
Download data: CALLS, PAIR
Sample
Accession:
GSM566758
ID:
300566758

5.

kyp_2

Organism:
Arabidopsis thaliana
Source name:
kyp
Platform:
GPL10689
Series:
GSE22957 GSE23030
Download data: CALLS, PAIR
Sample
Accession:
GSM566757
ID:
300566757

6.

kyp_1

Organism:
Arabidopsis thaliana
Source name:
kyp
Platform:
GPL10689
Series:
GSE22957 GSE23030
Download data: CALLS, PAIR
Sample
Accession:
GSM566756
ID:
300566756

7.

wild type Col-0_2

Organism:
Arabidopsis thaliana
Source name:
wild type Col-0
Platform:
GPL10689
Series:
GSE22957 GSE23030
Download data: CALLS, PAIR
Sample
Accession:
GSM566755
ID:
300566755

8.

wild type Col-0_1

Organism:
Arabidopsis thaliana
Source name:
wild type Col-0
Platform:
GPL10689
Series:
GSE22957 GSE23030
Download data: CALLS, PAIR
Sample
Accession:
GSM566754
ID:
300566754

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