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Items: 10

1.

Target capture bisulfite sequencing (tcBS-seq) to evaluate clonal methylation inheritance [BiSulfite-seq]

(Submitter supplied) DNA methylation is considered a stable epigenetic mark due to its presumed long-term inheritance through cell divisions. Here, we perform high-throughput bisulfite sequencing on clonally derived cell lines to quantitatively measure mitotic methylation inheritance at the nucleotide level. We find that although DNA methylation is generally faithfully maintained at hypo- and hypermethylated sites, this is not the case at intermediately methylated CpGs. more...
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL24247
8 Samples
Download data: TXT
Series
Accession:
GSE234028
ID:
200234028
2.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
3.

Primary MEF cells, population D, DNMT3A/3B DKO (+ TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-D
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441381
ID:
307441381
4.

Primary MEF cells, population C, DNMT3A/3B DKO (+ TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-C
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441380
ID:
307441380
5.

Primary MEF cells, population B, DNMT3A/3B DKO (+ TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-B
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441379
ID:
307441379
6.

Primary MEF cells, population A, DNMT3A/3B DKO (+ TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-A
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441378
ID:
307441378
7.

Primary MEF cells, population D, control (no TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-D
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441377
ID:
307441377
8.

Primary MEF cells, population C, control (no TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-C
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441376
ID:
307441376
9.

Primary MEF cells, population B, control (no TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-B
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441375
ID:
307441375
10.

Primary MEF cells, population A, control (no TAT-CRE)

Organism:
Mus musculus
Source name:
MEF-A
Platform:
GPL24247
Series:
GSE234028 GSE234695
Download data: TXT
Sample
Accession:
GSM7441374
ID:
307441374
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Supplemental Content

db=gds|term=GSE234028[Accession]|query=1|qty=2|blobid=MCID_67525571baf2d2446b15d677|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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