GSE28078[Accession] - GEO DataSets - NCBI

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Select item 2000280781.

mRNA-Seq of whole flies from Drosophila

(Submitter supplied) We sequenced mRNA from whole flies of females and male of Drosophila melanogaster, D. simulans, D. yakuba, D. ananassae, D. pseudobscura, D. mojavensis, and D. virilis as part of the modENCODE project to validate novel gene models found in D. melanogaster, identify genes differentially expressed between the sexes and sex-specific alternative splicing events, and examine the evolution of gene expression.

Organism:: Drosophila ananassae; Drosophila mojavensis; Drosophila virilis; Drosophila melanogaster; Drosophila pseudoobscura; Drosophila simulans; Drosophila yakuba

Type:: Expression profiling by high throughput sequencing

14 related Platforms
32 Samples

Download data: BAM, RPKM, TXT

Series

Accession:: GSE28078

ID:: 200028078

PubMed Full text in PMC Similar studies modENCODE SRA Run Selector

Select item 1000133132.

Illumina HiSeq 2000 (Drosophila virilis)

Organism:: Drosophila virilis

19 Series
141 Samples

Platform

Accession:: GPL13313

ID:: 100013313

Select item 1000133123.

Illumina Genome Analyzer II (Drosophila virilis)

Organism:: Drosophila virilis

6 Series
13 Samples

Platform

Accession:: GPL13312

ID:: 100013312

Select item 1000133114.

Illumina HiSeq 2000 (Drosophila mojavensis)

Organism:: Drosophila mojavensis

9 Series
82 Samples

Platform

Accession:: GPL13311

ID:: 100013311

Select item 1000133105.

Illumina HiSeq 2000 (Drosophila pseudoobscura)

Organism:: Drosophila pseudoobscura

21 Series
191 Samples

Platform

Accession:: GPL13310

ID:: 100013310

Select item 1000133096.

Illumina HiSeq 2000 (Drosophila ananassae)

Organism:: Drosophila ananassae

14 Series
106 Samples

Platform

Accession:: GPL13309

ID:: 100013309

Select item 1000133087.

Illumina Genome Analyzer II (Drosophila ananassae)

Organism:: Drosophila ananassae

3 Series
6 Samples

Platform

Accession:: GPL13308

ID:: 100013308

Select item 1000133078.

Illumina HiSeq 2000 (Drosophila yakuba)

Organism:: Drosophila yakuba

16 Series
99 Samples

Platform

Accession:: GPL13307

ID:: 100013307

Select item 1000133069.

Illumina HiSeq 2000 (Drosophila simulans)

Organism:: Drosophila simulans

25 Series
94 Samples

Platform

Accession:: GPL13306

ID:: 100013306

Select item 10001330510.

Illumina Genome Analyzer II (Drosophila simulans)

Organism:: Drosophila simulans

4 Series
13 Samples

Platform

Accession:: GPL13305

ID:: 100013305

Select item 10001330411.

Illumina HiSeq 2000 (Drosophila melanogaster)

Organism:: Drosophila melanogaster

904 Series
18289 Samples

Platform

Accession:: GPL13304

ID:: 100013304

Select item 10001018112.

Illumina Genome Analyzer II (Drosophila mojavensis)

Organism:: Drosophila mojavensis

4 Series
8 Samples

Platform

Accession:: GPL10181

ID:: 100010181

Select item 10001006113.

Illumina Genome Analyzer II (Drosophila yakuba)

Organism:: Drosophila yakuba

7 Series
22 Samples

Platform

Accession:: GPL10061

ID:: 100010061

Select item 10000995814.

Illumina Genome Analyzer II (Drosophila pseudoobscura)

Organism:: Drosophila pseudoobscura

6 Series
11 Samples

Platform

Accession:: GPL9958

ID:: 100009958

Select item 10000906115.

Illumina Genome Analyzer II (Drosophila melanogaster)

Organism:: Drosophila melanogaster

139 Series
1403 Samples

Platform

Accession:: GPL9061

ID:: 100009061

Select item 30109185016.

Whole_Dvir_1051.87_Male_Rep2

Organism:: Drosophila virilis

Source name:: Whole tissue

Platform:: GPL13313
Series:: GSE28078 GSE44612

Download data: RPKM, TXT

Sample

Accession:: GSM1091850

ID:: 301091850

SRA Run Selector

Select item 30109184817.

Whole_Dana_371.13_Male_Rep2

Organism:: Drosophila ananassae

Source name:: Whole tissue

Platform:: GPL13309
Series:: GSE28078 GSE44612

Download data: RPKM, TXT

Sample

Accession:: GSM1091848

ID:: 301091848

SRA Run Selector

Select item 30109184718.

Whole_Dana_371.13_Male_Rep1

Organism:: Drosophila ananassae

Source name:: Whole tissue

Platform:: GPL13308
Series:: GSE28078 GSE44612

Download data: RPKM, TXT

Sample

Accession:: GSM1091847

ID:: 301091847

SRA Run Selector

Select item 30109184919.

Whole_Dvir_1051.87_Male_Rep1

Organism:: Drosophila virilis

Source name:: Whole tissue

Platform:: GPL13312
Series:: GSE28078 GSE44612

Download data: RPKM, TXT

Sample

Accession:: GSM1091849

ID:: 301091849

SRA Run Selector

Select item 30109184620.

Whole_Dyak_261.01_Male_Rep2

Organism:: Drosophila yakuba

Source name:: Whole tissue

Platform:: GPL13307
Series:: GSE28078 GSE44612

Download data: RPKM, TXT

Sample

Accession:: GSM1091846

ID:: 301091846

SRA Run Selector

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