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Items: 6

1.

DNA methylome and transcriptome analysis of normal and HBx transgenic mouse liver

(Submitter supplied) A genome-wide integrated methylome and transcriptome analysis of the early stage of hepatocellular carcinoma development that induced by HBx. The HBV x (HBx) protein, which plays a critical role in the development of HCC, was shown to interact with several epigenetic factors, such as DNMT3A and HDAC1. Most HBx transgenic (TG) mice spontaneously develop HCC at about 1 year of age, providing genetic validation of the oncogenic potential of HBx even in the absence of viral integration and chronic inflammation. more...
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL17021
4 Samples
Download data: RPKM
Series
Accession:
GSE48052
ID:
200048052
2.

Illumina HiSeq 2500 (Mus musculus)

Platform
Accession:
GPL17021
ID:
100017021
3.

HBx_RNA

Organism:
Mus musculus
Source name:
liver
Platform:
GPL17021
Series:
GSE48052
Download data: RPKM
Sample
Accession:
GSM1277693
ID:
301277693
4.

Normal_RNA

Organism:
Mus musculus
Source name:
liver
Platform:
GPL17021
Series:
GSE48052
Download data: RPKM
Sample
Accession:
GSM1277692
ID:
301277692
5.

HBx_MIRA

Organism:
Mus musculus
Source name:
liver
Platform:
GPL17021
Series:
GSE48052
Download data: RPKM
Sample
Accession:
GSM1277691
ID:
301277691
6.

Normal_MIRA

Organism:
Mus musculus
Source name:
liver
Platform:
GPL17021
Series:
GSE48052
Download data: RPKM
Sample
Accession:
GSM1277690
ID:
301277690
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Supplemental Content

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