GSE5087[Accession] - GEO DataSets - NCBI

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Select item 2000050871.

CGH analysis between Xcc strains and transcriptome analysis of Xcc 8004 grown in NYG and XVM2

(Submitter supplied) Xanthomonas campestris pathovar campestris (Xcc), the causal agent of black rot disease of cruciferous plants worldwide, is composed of phenotypically heterogeneous groups of strains. The knowledge about the genome diversity and phylogenetic relationships between Xcc strains with different origins are of great interest as they provide insight into the mechanisms of pathogenicity, host preferences and evolution of this pathogen. more...

Organism:: Xanthomonas campestris pv. campestris

Type:: Expression profiling by array; Genome variation profiling by array

Platform:: GPL3842
28 Samples

Download data: GPR

Series

Accession:: GSE5087

ID:: 200005087

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000038422.

XCC 4.3K cDNA array

(Submitter supplied) as described in National Engineering Research Center for Beijing Biochip Technology(CapitalBio Corporation) manual

Organism:: Xanthomonas campestris pv. campestris

1 Series
28 Samples

Platform

Accession:: GPL3842

ID:: 100003842

Select item 3001146173.

expression_8004#-XVM2_8004#-NYG_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004#-XVM2 (channel 1) strain 8004#-NYG (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114617

ID:: 300114617

Select item 3001146164.

expression_8004#-XVM2_8004#-NYG_2

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004#-NYG (channel 1) strain 8004#-XVM2 (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114616

ID:: 300114616

Select item 3001143495.

CGH_1# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 1# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114349

ID:: 300114349

Select item 3001143466.

CGH_33913# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 33913# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114346

ID:: 300114346

Select item 3001143397.

CGH_8004# vs 8004#_2

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114339

ID:: 300114339

Select item 3001143388.

CGH_8004# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114338

ID:: 300114338

Select item 3001143379.

CGH_20# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 20# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114337

ID:: 300114337

Select item 30011433510.

CGH_18# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 18# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114335

ID:: 300114335

Select item 30011433211.

CGH_17# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 17# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114332

ID:: 300114332

Select item 30011433012.

CGH_16# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 16# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114330

ID:: 300114330

Select item 30011432813.

CGH_15# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 15# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114328

ID:: 300114328

Select item 30011432614.

CGH_14# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 14# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114326

ID:: 300114326

Select item 30011432415.

CGH_12# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 12# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114324

ID:: 300114324

Select item 30011432316.

CGH_12# vs 8004#_2

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 12# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114323

ID:: 300114323

Select item 30011432217.

CGH_11# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 11# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114322

ID:: 300114322

Select item 30011432118.

CGH_10# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 10# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114321

ID:: 300114321

Select item 30011432019.

CGH_9# vs 8004#_1

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8004# gDNA (channel 1) strain 9# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114320

ID:: 300114320

Select item 30011431820.

CGH_8# vs 8004#_2

Organism:: Xanthomonas campestris pv. campestris

Source name:: strain 8# gDNA (channel 1) strain 8004# gDNA (channel 2)

Platform:: GPL3842
Series:: GSE5087

Download data: GPR

Sample

Accession:: GSM114318

ID:: 300114318

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