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Items: 5

1.

Transcriptome sequencing at early stage infection of the wheat pathogen Zymoseptoria tritici reveals chromosomal differences in transcription patterns and host specific gene expression.

(Submitter supplied) We have applied whole transcriptome profiling to infer genetic determinants of pathogenicity and host specialization in Z. tritici. Our data includes RNAseq data from early infection stages of a compatible (wheat) and a non-compatible host (Brachypodium distachyon). Overall transcription of AC genes is remarkably lower than genes on core chromosomes (CC) and only 40% of the genes are transcribed. We identify 31 AC and 1069 CC genes showing plant specific expression. more...
Organism:
Zymoseptoria tritici
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18273
3 Samples
Download data: TXT
Series
Accession:
GSE54874
ID:
200054874
2.

Illumina HiSeq 2000 (Zymoseptoria tritici)

Organism:
Zymoseptoria tritici
2 Series
15 Samples
Download data
Platform
Accession:
GPL18273
ID:
100018273
3.

IPO323_Bd

Organism:
Zymoseptoria tritici
Source name:
infected B. distachyon leaf
Platform:
GPL18273
Series:
GSE54874
Download data: TXT
Sample
Accession:
GSM1325468
ID:
301325468
4.

IPO323_Ta

Organism:
Zymoseptoria tritici
Source name:
infected wheat leaf
Platform:
GPL18273
Series:
GSE54874
Download data: TXT
Sample
Accession:
GSM1325467
ID:
301325467
5.

IPO323_YMS

Organism:
Zymoseptoria tritici
Source name:
yeast cells
Platform:
GPL18273
Series:
GSE54874
Download data: TXT
Sample
Accession:
GSM1325466
ID:
301325466
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Supplemental Content

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