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Items: 6

1.

Identification of Transcription Factor EFL-1::GFP Binding Regions in L1

(Submitter supplied) modENCODE_submission_3211 This submission comes from a modENCODE project of Michael Snyder. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We are identifying the DNA binding sites for 300 transcription factors in C. elegans. Each transcription factor gene is tagged with the same GFP fusion protein, permitting validation of the gene's correct spatio-temporal expression pattern in transgenic animals. more...
Organism:
Caenorhabditis elegans
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9309
4 Samples
Download data: BEDGRAPH, GFF3
Series
Accession:
GSE56707
ID:
200056707

modENCODESRA Run Selector

2.

Illumina Genome Analyzer (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
378 Series
1480 Samples
Download data
Platform
Accession:
GPL9309
ID:
100009309

3.

Snyder_EFL-1_GFP_L1 ChIP Rep3

Organism:
Caenorhabditis elegans
Source name:
EFL-1_GFP_L1 ChIP Rep.3
Platform:
GPL9309
Series:
GSE56707
Download data: BEDGRAPH, GFF3
Sample
Accession:
GSM1367112
ID:
301367112

SRA Run Selector

4.

Snyder_EFL-1_GFP_L1 ChIP Rep2

Organism:
Caenorhabditis elegans
Source name:
EFL-1_GFP_L1 ChIP Rep.2
Platform:
GPL9309
Series:
GSE56707
Download data: BEDGRAPH, GFF3
Sample
Accession:
GSM1367111
ID:
301367111

SRA Run Selector

5.

Snyder_EFL-1_GFP_L1 Input Rep3

Organism:
Caenorhabditis elegans
Source name:
EFL-1_GFP_L1 Input Rep.3
Platform:
GPL9309
Series:
GSE56707
Download data: BEDGRAPH
Sample
Accession:
GSM1367110
ID:
301367110

SRA Run Selector

6.

Snyder_EFL-1_GFP_L1 Input Rep2 extraction3_seq3

Organism:
Caenorhabditis elegans
Source name:
EFL-1_GFP_L1 Input Rep.2 extraction4_seq4
Platform:
GPL9309
Series:
GSE56707
Download data: BEDGRAPH
Sample
Accession:
GSM1367109
ID:
301367109

SRA Run Selector

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db=gds|term=GSE56707[Accession]|query=1|qty=2|blobid=MCID_66ebe8ffb3438a057604cff5|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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