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Items: 1 to 20 of 25

1.

Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome

(Submitter supplied) We recently identified a novel protein, Rearranged L-myc fusion (Rlf), that is required for DNA hypomethylation (and transcriptional activity) at certain regions of the mouse genome known to be sensitive to epigenetic gene silencing. Here we report the analysis of 12 whole genome bisulphite sequencing datasets across three different embryonic tissues/stages from mice with and without Rlf. We find that its absence has effects at thousands of differentially methylated regions.
Organism:
Mus musculus
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19057 GPL13112
22 Samples
Download data: BW, TAB
Series
Accession:
GSE58108
ID:
200058108
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
4.

E14.5_liver_Rlf_mutant_RNA-Seq_rep3

Organism:
Mus musculus
Source name:
E14.5 liver
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1403296
ID:
301403296
5.

E14.5_liver_Rlf_mutant_RNA-Seq_rep2

Organism:
Mus musculus
Source name:
E14.5 liver
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1403295
ID:
301403295
6.

E14.5_liver_Rlf_mutant_RNA-Seq_rep1

Organism:
Mus musculus
Source name:
E14.5 liver
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1403294
ID:
301403294
7.

E14.5_liver_wildtype_RNA-Seq_rep3

Organism:
Mus musculus
Source name:
E14.5 liver
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1403293
ID:
301403293
8.

E14.5_liver_wildtype_RNA-Seq_rep2

Organism:
Mus musculus
Source name:
E14.5 liver
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1403292
ID:
301403292
9.

E14.5_liver_wildtype_RNA-Seq_rep1

Organism:
Mus musculus
Source name:
E14.5 liver
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1403291
ID:
301403291
10.

MommeD28/MommeD28 mutant E18.5 liver rep2

Organism:
Mus musculus
Source name:
E18.5 liver rep2
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400935
ID:
301400935
11.

MommeD28/MommeD28 mutant E18.5 liver rep1

Organism:
Mus musculus
Source name:
E18.5 liver rep1
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400934
ID:
301400934
12.

Wildtype E18.5 liver rep2

Organism:
Mus musculus
Source name:
E18.5 liver rep2
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400933
ID:
301400933
13.

Wildtype E18.5 liver rep1

Organism:
Mus musculus
Source name:
E18.5 liver rep1
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400932
ID:
301400932
14.

MommeD28/MommeD28 mutant E14.5 liver rep2

Organism:
Mus musculus
Source name:
E14.5 liver rep2
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400931
ID:
301400931
15.

MommeD28/MommeD28 mutant E14.5 liver rep1

Organism:
Mus musculus
Source name:
E14.5 liver rep1
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400930
ID:
301400930
16.

Wildtype E14.5 liver rep2

Organism:
Mus musculus
Source name:
E14.5 liver rep2
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400929
ID:
301400929
17.

Wildtype E14.5 liver rep1

Organism:
Mus musculus
Source name:
E14.5 liver rep1
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400928
ID:
301400928
18.

MommeD28/MommeD28 mutant E10.5 embryo rep2

Organism:
Mus musculus
Source name:
E10.5 embryo rep2
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400927
ID:
301400927
19.

MommeD28/MommeD28 mutant E10.5 embryo rep1

Organism:
Mus musculus
Source name:
E10.5 embryo rep1
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400926
ID:
301400926
20.

Wildtype E10.5 embryo rep2

Organism:
Mus musculus
Source name:
E10.5 embryo rep2
Platform:
GPL13112
Series:
GSE58108
Download data: TAB
Sample
Accession:
GSM1400925
ID:
301400925
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Supplemental Content

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