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Items: 6

1.

Identification of N6-adenine methylation in C. elegans DNA

(Submitter supplied) In mammalian cells, DNA methylation on the 5th position of cytosine (5mC) plays an important role as an epigenetic mark. However, DNA methylation was considered to be absent in C. elegans because of the lack of detectable 5mC as well as homologs of the cytosine DNA methyltransferases. Here, using multiple approaches, we demonstrate the presence of adenine N6-methylation (6mA) in C. elegans DNA. We further demonstrate that this modification increases trans-generationally in a paradigm of epigenetic inheritance. more...
Organism:
Caenorhabditis elegans
Type:
Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19919 GPL18245
3 Samples
Download data: BW, GFF, NARROWPEAK
Series
Accession:
GSE66504
ID:
200066504
2.

PacBio RS II (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
3 Series
3 Samples
Download data
Platform
Accession:
GPL19919
ID:
100019919
3.

Illumina HiSeq 2500 (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
454 Series
7801 Samples
Download data
Platform
Accession:
GPL18245
ID:
100018245
4.

ChIP-Seq (input)

Organism:
Caenorhabditis elegans
Source name:
whole worm WT gDNA
Platform:
GPL18245
Series:
GSE66504
Download data: BW
Sample
Accession:
GSM1688841
ID:
301688841
5.

ChIP-Seq

Organism:
Caenorhabditis elegans
Source name:
whole worm WT gDNA
Platform:
GPL18245
Series:
GSE66504
Download data: BW, NARROWPEAK
Sample
Accession:
GSM1688840
ID:
301688840
6.

SMRT-sequencing

Organism:
Caenorhabditis elegans
Source name:
whole worm WT gDNA
Platform:
GPL19919
Series:
GSE66504
Download data: GFF
Sample
Accession:
GSM1637798
ID:
301637798
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Supplemental Content

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