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Items: 4

1.

Defining a molecular roadmap of cellular reprogramming into iPS cells

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Murid gammaherpesvirus 4; Betapolyomavirus hominis; human gammaherpesvirus 4; JC polyomavirus; Human gammaherpesvirus 8; Betapolyomavirus macacae; Rattus norvegicus; Human alphaherpesvirus 2; Merkel cell polyomavirus; Mus musculus; Human alphaherpesvirus 1; Human betaherpesvirus 5; Murid betaherpesvirus 1; Human immunodeficiency virus 1
Type:
Expression profiling by array; Non-coding RNA profiling by array; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by genome tiling array
5 related Platforms
61 Samples
Download data: BIGWIG, CEL, PAIR, TXT
Series
Accession:
GSE42478
ID:
200042478
2.

Defining a molecular roadmap of cellular reprogramming into iPS cells [miRNA profiling]

(Submitter supplied) Factor induced reprogramming is a slow and inefficient process with only rare cells progressing towards induced pluripotent stem cells (iPSCs). Owing to these restraints, mechanistic studies have been limited to analyses of heterogeneous bulk populations undergoing reprogramming and partially reprogrammed cell lines. Here, by combining surface markers (Thy1, SSEA1) and an Oct4-GFP fluorescent reporter allele, we analyzed defined intermediate cell populations poised to becoming iPSCs at the transcriptional and epigenetic levels using genome-wide and single cell technologies. more...
Organism:
Human alphaherpesvirus 1; Human betaherpesvirus 5; human gammaherpesvirus 4; Betapolyomavirus macacae; Rattus norvegicus; Human alphaherpesvirus 2; JC polyomavirus; Murid gammaherpesvirus 4; Betapolyomavirus hominis; Mus musculus; Human immunodeficiency virus 1; Human gammaherpesvirus 8; Homo sapiens; Murid betaherpesvirus 1; Merkel cell polyomavirus
Type:
Non-coding RNA profiling by array
Platform:
GPL14957
18 Samples
Download data: TXT
Series
Accession:
GSE42475
ID:
200042475
3.

Exiqon miRCURY LNA microRNA Array 5th generation (DesignedFor miRBase 14.0, CurrentVersion miRBase 16.0)

(Submitter supplied) See manufacturer's website.
Organism:
Homo sapiens; Mus musculus; Rattus norvegicus; Human alphaherpesvirus 1; Human alphaherpesvirus 2; Human betaherpesvirus 5; Murid betaherpesvirus 1; human gammaherpesvirus 4; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Merkel cell polyomavirus; Betapolyomavirus hominis; Betapolyomavirus macacae
5 Series
34 Samples
Download data
Platform
Accession:
GPL14957
ID:
100014957
4.

KH2-MEF_m2 [miRNA]

Organism:
Mus musculus
Source name:
Sorted cells (channel 1) a pool of all the samples (channel 2)
Platform:
GPL14957
Series:
GSE42475 GSE42478
Download data: TXT
Sample
Accession:
GSM1040692
ID:
301040692
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