GSM1318865[Accession] - GEO DataSets

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Items: 4

Select item 2000547281.

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Arabidopsis lyrata; Arabidopsis thaliana; Arabis alpina

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platforms:: GPL16940 GPL18238 GPL11221
30 Samples

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Accession:: GSE54728

ID:: 200054728

Select item 2000545602.

Genome-wide profiling of H3K4me3, H3K27me3 H3K27me1 and 5mC enrichment and mRNA levels in young leaves of Arabis alpina

(Submitter supplied) Chromatin, DNA and RNA were extracted from young A. alpina Pajares primary stem leaves. Chromatin and DNA methylation immunoprecipitation experiments were performed using commercially available antibodies and analyzed by Illumina sequencing (ChIP-seq and MeDIP-seq). Transcriptome data were generated by RNA-seq.

Organism:: Arabis alpina

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing