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Items: 4

1.

Epigenome signatures during gastric carcinogenesis based on next generation sequencing

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array; SNP genotyping by SNP array; Methylation profiling by high throughput sequencing
Platforms:
GPL6801 GPL9115
12 Samples
Download data: BED, CEL, CHP
Series
Accession:
GSE55160
ID:
200055160
2.

Epigenome signatures during gastric carcinogenesis based on next generation sequencing analysis [MBD-Seq]

(Submitter supplied) Because gastric cancer cells already had genetic and epigenetic alterations which can affect the gastric carcinogenesis, we tried to characterize genetic and epigenetic changes during gastric carcinogenesis. To do this, we performed MBD sequencing and RRBS sequencing.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL9115
3 Samples
Download data: BED
Series
Accession:
GSE55157
ID:
200055157
3.

Illumina Genome Analyzer II (Homo sapiens)

Platform
Accession:
GPL9115
ID:
100009115
4.

1154337-MBD-GM

Organism:
Homo sapiens
Source name:
gastric normal mucosa cells
Platform:
GPL9115
Series:
GSE55157 GSE55160
Download data: BED
Sample
Accession:
GSM1330609
ID:
301330609
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