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Items: 4

1.

High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Schizosaccharomyces pombe
Type:
Genome variation profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array; Other
Platforms:
GPL6503 GPL8908 GPL13988
14 Samples
Download data: TSV, TXT
Series
Accession:
GSE56849
ID:
200056849
2.

High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture [ChIP-chip]

(Submitter supplied) ChIP-chip analyses of Psc3 in wild-type and mutant fission yeast cells. Eukaryotic genomes are folded into three-dimensional structures that govern diverse hromosomal procsses. Studeis in Drosophila and mammals have revealed large self-associating tomological domains whose borders are enriched in cohesin/CTCF factors that are required for long-range intrations. However, mechanisms governing higher-order folding of chromatin fivbers and the exact function of cohesin in this process remain poor understood. more...
Organism:
Schizosaccharomyces pombe
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL6503
3 Samples
Download data: TXT
Series
Accession:
GSE56848
ID:
200056848
3.

Agilent-016010 S.pombe 4X44K_v3 (Feature Number version)

(Submitter supplied) Agilent 60mer oligo arrays tiling entire S. pombe genome across 3 chromsomes at 300bp interval alternately from the plus and minus strand. Choromosome locations in data table are based on assembled contigs at ftp://ftp.sanger.ac.uk/pub/yeast/pombe/Chromosome_contigs/OLD/Sep_15_2004 Protocol: Custom 60mer oligonucleotide microarrays based upon Agilent’s non-contact in situ synthesis process
Organism:
Schizosaccharomyces pombe
44 Series
259 Samples
Download data
Platform
Accession:
GPL6503
ID:
100006503
4.

Psc3-GFP_G1_cells-v50_2007

Organism:
Schizosaccharomyces pombe
Source name:
input DNA (channel 1) Psc3 ChIP in cdc10-v50 cells (channel 2)
Platform:
GPL6503
Series:
GSE56848 GSE56849
Download data: TXT
Sample
Accession:
GSM1370194
ID:
301370194
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