GSM146828[Accession] - GEO DataSets

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Items: 3

Select item 2000063501.

Transcriptomic profiling of the livers of blue catfish (Ictalurus furcatus) after infection with Edwardsiella ictaluri

(Submitter supplied) We have utilized a high-density oligonucleotide microarray for catfish in order to study the transcriptomic responses of blue catfish following infection with E. ictaluri and to identify and develop important immune-related markers for future characterization and genetic mapping. Microarray analysis of the transcriptome profile of the blue catfish liver following infection with the Gram negative bacterium led to the identification of 103 differentially expressed transcripts. more...

Organism:: Ictalurus punctatus; Ictalurus furcatus

Type:: Expression profiling by array

Platform:: GPL4476
6 Samples

Download data: FTR

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Accession:: GSE6350

ID:: 200006350

Select item 1000044762.

Nimblegen Catfish 28K Oligo Microarray

(Submitter supplied) This platform builds upon a previous 19K channel catfish microarray design (GPL2814). Newly sequenced immune and miscellaneous transcripts from channel catfish were added bringing the number of sequences from that species to 21,359. Additionally, 7,159 unique ESTs from the closely-related species blue catfish (Ictalurus furcatus) were added. Protocol: Nimblegen utilized an in situ maskless array synthesis technology to synthesize 24 base pair (24mer) oligos on the surface of the microarray slides. more...