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Items: 3

1.

On the Origin and Evolutionary Consequences of Gene Body DNA Methylation

(Submitter supplied) In plants, CG DNA methylation is prevalent in the transcribed regions of constitutively expressed genes (“gene body methylation; gbM”), but the origin and function of gbM remain unknown. Here we report the discovery that Eutrema salsugineum, has lost gbM from its genome, the first known instance for a flowering plant. Of all known DNA methyltransferases, only CHROMOMETHYLTRANSFERASE 3 (CMT3) is missing from E. more...
Organism:
Arabidopsis thaliana; Capsella rubella; Brassica rapa; Arabidopsis lyrata; Brassica oleracea; Eutrema salsugineum
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis
10 related Platforms
44 Samples
Download data: BED, TSV
Series
Accession:
GSE75071
ID:
200075071
2.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
392 Series
9008 Samples
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Platform
Accession:
GPL19580
ID:
100019580
3.

met1_epiRIL_01_MethylC-seq

Organism:
Arabidopsis thaliana
Source name:
met1_epiRIL_01_MethylC-seq
Platform:
GPL19580
Series:
GSE75071
Download data: TSV
Sample
Accession:
GSM1942131
ID:
301942131
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db=gds|term=GSM1942131[Accession]|query=1|qty=7|blobid=MCID_665519016c05354989be4f0e|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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