GSM2111743[Accession] - GEO DataSets

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Items: 4

Select item 2000800541.

Transcriptome-wide RNA 5-methylcytosine methylation in siliques, shoots and roots and root gene expression profiling of Arabidopsis thaliana

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other

Platform:: GPL13222
29 Samples

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Series

Accession:: GSE80054

ID:: 200080054

Select item 2000800512.

Transcriptome-wide RNA 5-methylcytosine methylation in shoots of Arabidopsis thaliana

(Submitter supplied) Here we use bisulfite conversion of rRNA depleted RNA combined with high-throughput Illumina sequencing (RBS-seq) to identify single-nucleotide resolution of m5C sites transcriptome-wide in Arabidopsis thaliana seedlings. m5C sites were also analyzed in Arabidopsis trm4b-1 and trdmt1 T-DNA KO mutants for the RNA methyltransferases TRM4B and TRDMT1.