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Items: 4

1.

DNA sequence properties that determine susceptibility to epiallelic switching

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array; Methylation profiling by high throughput sequencing
4 related Platforms
22 Samples
Download data: CEL, TXT
Series
Accession:
GSE89592
ID:
200089592
2.

DNA sequence properties that determine susceptibility to epiallelic switching [Affymetrix]

(Submitter supplied) Transgenerationally heritable epialleles are defined by the stable propagation of alternative transcriptional states through mitotic and meiotic cell cycles. Given that the propagation of DNA methylation at CpG sites, mediated in Arabidopsis by MET1, plays a central role in epigenetic inheritance, we examined genome-wide DNA methylation in partial and complete loss-of-function met1 mutants. We interpreted the data in relation to transgenerational epiallelic stability and provide evidence that DNA sequence features such as density of CpGs and genomic repetitiveness of the loci largely determine their susceptibility to epiallelic switching. more...
Organism:
Arabidopsis thaliana
Type:
Expression profiling by genome tiling array
Platform:
GPL10977
12 Samples
Download data: CEL, CSV
Series
Accession:
GSE89586
ID:
200089586
3.

[At35b_MR] Affymetrix Arabidopsis Tiling 1.0R Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Protocol: see manufacturer's web site
Organism:
Arabidopsis thaliana
75 Series
540 Samples
Download data
Platform
Accession:
GPL10977
ID:
100010977
4.

met1-3_rep3

Organism:
Arabidopsis thaliana
Source name:
met1-3
Platform:
GPL10977
Series:
GSE89586 GSE89592
Download data: CEL
Sample
Accession:
GSM2384935
ID:
302384935
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