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Items: 3

1.

Degradation of unmethylated miRNA/miRNA*s by a DEDDy-type 3’ to 5’ exoribonuclease ATRIMMER2 in Arabidopsis

(Submitter supplied) 3’ end methylation catalyzed by HUA ENHANCER1 (HEN1) is a crucial step of small RNA stabilization in plants, yet how unmethylated small RNAs undergo degradation remains largely unknown. Using a reverse genetic approach, we here show that ATRIMMER2 (ATRM2), a DEDDy-type 3’ to 5’ exoribonuclease, acts in the degradation of unmethylated miRNAs and miRNA*s in Arabidopsis. A loss-of-function mutations in ATRM2 partially suppress the morphological defects caused by HEN1 malfunction, with restored levels of a subset of miRNAs and receded expression of corresponding miRNA targets. more...
Organism:
Arabidopsis thaliana
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL17639
16 Samples
Download data: TXT
Series
Accession:
GSE107070
ID:
200107070
2.

Illumina HiSeq 2500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
821 Series
14604 Samples
Download data
Platform
Accession:
GPL17639
ID:
100017639
3.

hen1-8 heso1-1 atrm2-1 Rep2

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE107070
Download data
Sample
Accession:
GSM2860563
ID:
302860563
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