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Items: 4

1.

Epigenetic maintenance of topological domains in the rearranged gibbon genome

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Macaca mulatta; Nomascus leucogenys
Type:
Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL14954 GPL25056 GPL25055
6 Samples
Download data: BED, BEDGRAPH
Series
Accession:
GSE115065
ID:
200115065
2.

Epigenetic maintenance of topological domains in the rearranged gibbon genome [ChIP-seq]

(Submitter supplied) The relationship between evolutionary genome remodeling and the three-dimensional structure of the genome remain largely unexplored. Here we use the heavily rearranged gibbon genome to examine how evolutionary chromosomal rearrangements impact genome-wide chromatin interactions, topologically associating domains (TADs), and their epigenetic landscape. We use high-resolution maps of gibbon-human breaks of synteny (BOS), apply Hi-C in gibbon, measure an array of epigenetic features, and perform cross-species comparisons. more...
Organism:
Nomascus leucogenys
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL25055
3 Samples
Download data: BW
Series
Accession:
GSE115064
ID:
200115064
3.

Illumina NextSeq 500 (Nomascus leucogenys)

Organism:
Nomascus leucogenys
10 Series
15 Samples
Download data
Platform
Accession:
GPL25055
ID:
100025055
4.

Gibbon_H3K4me3_rep1

Organism:
Nomascus leucogenys
Source name:
Lymphoblasts
Platform:
GPL25055
Series:
GSE115064 GSE115065
Download data
Sample
Accession:
GSM3164321
ID:
303164321
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Supplemental Content

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