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Items: 4

1.

Glioblastoma epigenome profiling identifies SOX10 as a master regulator of molecular tumour subtype

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Expression profiling by array; Methylation profiling by genome tiling array; Methylation profiling by high throughput sequencing
5 related Platforms
364 Samples
Download data: BED, BIGWIG, BW, CEL
Series
Accession:
GSE121723
ID:
200121723
2.

Glioblastoma epigenome profiling identifies SOX10 as a master regulator of molecular tumour subtype - cell line ChIPseq experiments

(Submitter supplied) Glioblastomas in adult patients are classified into four subtypes, IDH, MES, RTK I, and RTK II, based on DNA-methylation and RNA-expression data. Tumour subtype transitions are common during treatment, and transitions to the mesenchymal (MES) subtype are associated with therapy resistance and adverse prognosis. Here, we present DNA methylome and histone modification data of glioblastoma primary tumours and find that glioblastoma subtypes differ in their enhancer landscapes. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11154
20 Samples
Download data: BED, BIGWIG, BW
Series
Accession:
GSE121716
ID:
200121716
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

LN229_shSOX10_H3K4me1

Organism:
Homo sapiens
Source name:
LN229_shSOX10
Platform:
GPL11154
Series:
GSE121716 GSE121723
Download data: BED, BIGWIG
Sample
Accession:
GSM3444418
ID:
303444418
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Supplemental Content

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