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Items: 3

1.

High-resolution analysis of chromatin structure by Mnase-SSP

(Submitter supplied) Proof-of-concept for Mnase-SSP: a variant of Mnase-seq. Mnase-SSP dramatically increases the representation of short fragments of nucleolytically-digested DNA, enabling simultaneous analysis of transcription factor binding and nucleosome occupancy using the same assay. We used MNase-SSP to demarcate chromatin architecture at murine promoters and at transcription factor binding sites in murine embryonic stem cells. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL16417 GPL19057
14 Samples
Download data: BAI, BAM
Series
Accession:
GSE125053
ID:
200125053
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

Male 20 min digestion SSP

Organism:
Mus musculus
Source name:
Male F123 mESCs from Cast/129 backgrond
Platform:
GPL19057
Series:
GSE125053
Download data: BAI, BAM
Sample
Accession:
GSM3561981
ID:
303561981
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