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Items: 3

1.

Single Cell RNA-Seq Reveals Changing Landscape of Cell-to-Cell Variation Induced by CTCF Knockdown

(Submitter supplied) In this study, we knockdown the expression of CTCF in EL4 cells by shRNA, followed by single cell RNA-seq on both wild type (WT) cells and CTCF-Knockdown (CTCF-KD) cells. Principal component analysis (PCA) of single cell RNA-seq data showed that WT cells and CTCF-KD cells essentially concentrated in two different clusters on the PCA projection, indicating gene expression profiles of CTCF-KD cells and WT cells were systematically different. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21493
96 Samples
Download data: TXT
Series
Accession:
GSE135769
ID:
200135769
2.

Illumina HiSeq 3000 (Mus musculus)

Platform
Accession:
GPL21493
ID:
100021493
3.

S64: WT2_singleCell

Organism:
Mus musculus
Source name:
EL4
Platform:
GPL21493
Series:
GSE135769
Download data
Sample
Accession:
GSM4029451
ID:
304029451
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db=gds|term=GSM4029451[Accession]|query=1|qty=2|blobid=MCID_667a0f328c5d4760e210e203|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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