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Items: 4

1.

High-throughput sequencing analysis of a “hit and run” cell and animal model of KSHV tumorigenesis.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL13112 GPL19057
30 Samples
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Series
Accession:
GSE148742
ID:
200148742
2.

High-throughput sequencing analysis of a “hit and run” cell and animal model of KSHV tumorigenesis. [RNA-Seq]

(Submitter supplied) Kaposi's sarcoma (KS), is an AIDS-associated neoplasm caused by the KS herpesvirus (KSHV). A mouse model of KSHV-dependent tumorigenicity, allowed us to induce KSHV viral-episome loss following tumor development to test the plausibility of “hit and run” mechanism by KSHV. RNA-seq-transcriptome analysis and CpG-methylation were performed on KSHV positive cells, KSHV positive tumors and tumors that developed following viral-episome loss. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
15 Samples
Download data: CSV
Series
Accession:
GSE144101
ID:
200144101
3.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
4.

KSHV (+) cells [DS003accepted_hitsmouse]

Organism:
Mus musculus
Source name:
KSHV (+) cells
Platform:
GPL19057
Series:
GSE144101 GSE148742
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Sample
Accession:
GSM4279922
ID:
304279922
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Supplemental Content

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