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Items: 4

1.

Structural and Functional Analysis of Viral siRNAs

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Cymbidium ringspot virus; Nicotiana benthamiana
Type:
Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL15026 GPL10313
6 Samples
Download data: FNA, QUAL
Series
Accession:
GSE17278
ID:
200017278

PubMed Full text in PMC Similar studies

2.

Structural and Functional Analysis of Viral siRNAs using 454 sequencing

(Submitter supplied) We profiled vsiRNAs using two different high-throughput sequencing platforms and also developed a hybridisation-based array approach. The profiles obtained through the Solexa platform and by hybridisation were very similar to each other but different from the 454 profile. Both deep sequencing techniques revealed a strong bias in vsiRNAs for the positive strand of the virus and identified regions on the viral genome that produced vsiRNA in much higher abundance than other regions. more...
Organism:
Cymbidium ringspot virus; Nicotiana benthamiana
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL15026
2 Samples
Download data: FNA, QUAL, TXT
Series
Accession:
GSE17164
ID:
200017164

PubMed Full text in PMC Similar studies

3.

454 GS (Cymbidium ringspot virus; Nicotiana benthamiana)

Organism:
Nicotiana benthamiana; Cymbidium ringspot virus
2 Series
2 Samples
Download data
Platform
Accession:
GPL15026
ID:
100015026

4.

454-sequenced P19 silencing suppressor mutant Cymbidium Ringspot Virus (Cym19stop)-derived siRNAs

Organism:
Nicotiana benthamiana; Cymbidium ringspot virus
Source name:
Early systemic leaves of Cym19stop-infected Nicotiana benthamiana
Platform:
GPL15026
Series:
GSE17164 GSE17278
Download data: FNA, QUAL
Sample
Accession:
GSM429420
ID:
300429420

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db=gds|term=GSM429420[Accession]|query=1|qty=3|blobid=MCID_66dcccb5ebdbf01cbf3393cb|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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