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Items: 3

1.

Transcriptome network analysis of Smug1 knock-out cells by using CRISPR/Cas9 system

(Submitter supplied) Purpose: To build a differential transcriptome network in Smug1 knock-out HepG2 hepatocarcinoma cells. Methods: Transcriptome analysis by the RNA-seq via mRNA pull-down. Results: We constructed transcriptome from Smug1 knock-out cells by using RNA-seq analysis. Nucleosome and miRNA related genes were highly enriched in Smug1 KO HepG2 cells. Conclusions: Smug1 regulate the gene expression related with nucleosome assembly and histone function.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
4 Samples
Download data: TXT
Series
Accession:
GSE145210
ID:
200145210

Analyze with GEO2RSRA Run Selector

2.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
12243 Series
349957 Samples
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Platform
Accession:
GPL16791
ID:
100016791

3.

Smug1-KO rep2

Organism:
Homo sapiens
Source name:
HepG2
Platform:
GPL16791
Series:
GSE145210
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Sample
Accession:
GSM4308524
ID:
304308524

SRA Run Selector

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db=gds|term=GSM4308524[Accession]|query=1|qty=2|blobid=MCID_6759ca89df415c74f80f2cec|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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