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Items: 3

1.

Loss of Lysine-Specific Demethylase 1 (LSD1) Drives Aberrant Heterochromatin Formation in Neurospora crassa

(Submitter supplied) Both H3K9me3 and DNA methylation are subject to spreading mechanisms to effectively cover incipient chromatin across heterochromatin domains. Boundary elements and associated limiting factors are necessary to prevent heterochromatin from spreading into neighboring, gene-rich heterochromatin. LSD1 was identified to be one such factor, given previous studies in other models and high conservation throughout eukaryotes. more...
Organism:
Neurospora crassa
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Third-party reanalysis
Platforms:
GPL20660 GPL23150 GPL16164
16 Samples
Download data: BED, BIGWIG, IGV, TDF, TXT
Series
Accession:
GSE137018
ID:
200137018
2.

Illumina HiSeq 4000 (Neurospora crassa)

Organism:
Neurospora crassa
20 Series
235 Samples
Download data
Platform
Accession:
GPL23150
ID:
100023150
3.

catalytic null lsd1 H3K9me3 ChIP-seq rep2

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL23150
Series:
GSE137018
Download data: BIGWIG
Sample
Accession:
GSM4667905
ID:
304667905
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db=gds|term=GSM4667905[Accession]|query=1|qty=2|blobid=MCID_669d1c1d56cb0a044ec3d50c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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