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Items: 4

1.

Genome-wide association studies reveal susceptibility loci for noninfectious claw lesions in Holstein dairy cattle

(Submitter supplied) Sole ulcers (SU) and white line disease (WLD) are noninfectious claw lesions that arise due to compromised horn production and are common causes of lameness in dairy cattle, imposing welfare and profitability concerns. The low to moderate heritability estimates of SU and WLD susceptibility indicate that genetic selection could reduce their prevalence. To identify loci associated with SU and WLD susceptibility, generalized linear mixed model (GLMM) regression and random forest (RF) genome-wide association studies (GWAS) were performed. more...
Organism:
Bos taurus
Type:
Genome variation profiling by SNP array
Platform:
GPL21267
326 Samples
Download data: IDAT, TXT
Series
Accession:
GSE165945
ID:
200165945
2.

Genome-wide association studies reveal susceptibility loci for digital dermatitis in Holstein cattle

(Submitter supplied) Digital dermatitis (DD) causes lameness in dairy cattle. To detect quantitative trait loci (QTL) associated with DD, genome-wide association studies (GWAS) were performed using high density single nucleotide polymorphism (SNP) genotypes and binary case/control, quantitative (average number of FW per hoof trimming record), and recurrent (cases with  2 DD episodes vs. controls) phenotypes from cows across four dairies (controls n = 129 vs. more...
Organism:
Bos taurus
Type:
Genome variation profiling by SNP array
Platform:
GPL21267
222 Samples
Download data: IDAT, TAB
Series
Accession:
GSE159157
ID:
200159157
3.

BovineHD BeadChip

(Submitter supplied) 777,000 SNPs Protocol: See manufacturer's website
Organism:
Bos taurus
9 Series
1819 Samples
Download data: CSV
Platform
Accession:
GPL21267
ID:
100021267
4.

blood_6

Organism:
Bos taurus
Source name:
blood from coccygeal vein in the tail
Platform:
GPL21267
Series:
GSE159157 GSE165945
Download data: IDAT
Sample
Accession:
GSM4820551
ID:
304820551
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db=gds|term=GSM4820551[Accession]|query=1|qty=2|blobid=MCID_6678bb0fccfbad768fd2d479|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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