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Items: 3

1.

Histone H2B.8 compacts flowering plant sperm through chromatin phase separation

(Submitter supplied) We characterised a sperm-expressed histone variant, H2B.8 in Arabidopsis by performing ChIP-seq, RNA-seq, and Hi-C. The data show that H2B.8 is exclusively deposited to unexpressed euchromatin and that gene expression is not significantly affected either by h2b.8 mutation in sperm or overexpression in soma. The deposition of H2B.8increases the contact probability of short range intrachromosomal interactions and contacts between pericentomeric regions and chromosome arms of different chromosomes.
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other
Platforms:
GPL19580 GPL23157
48 Samples
Download data: BED, BW, MATRIX, TXT
Series
Accession:
GSE161366
ID:
200161366
2.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
394 Series
9018 Samples
Download data
Platform
Accession:
GPL19580
ID:
100019580
3.

WT_seedling_RNAseq_rep3

Organism:
Arabidopsis thaliana
Source name:
WT seedling
Platform:
GPL19580
Series:
GSE161366
Download data
Sample
Accession:
GSM4905397
ID:
304905397
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db=gds|term=GSM4905397[Accession]|query=1|qty=2|blobid=MCID_6676dc588c5d4760e2d8ea66|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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