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Items: 4

1.

The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis

(Submitter supplied) ARABIDOPSIS THRITHORAX-RELATED PROTEINS 5 (ATXR5) AND ATXR6 are required for the deposition of H3K27me1 and for maintaining genomic stability in Arabidopsis. Reduction of ATXR5/6 activity results in activation of DNA damage response genes, along with tissue-specific derepression of transposable elements, chromocenter decompaction, and genomic instability characterized by accumulation of excess DNA from heterochromatin. more...
Organism:
Arabidopsis thaliana; blank sample
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL21785 GPL26208 GPL29487
241 Samples
Download data: BW, FPKM_TRACKING, TXT, WIG
Series
Accession:
GSE166897
ID:
200166897

PubMed Full text in PMC Similar studies

2.

The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [SMARTSeq2]

(Submitter supplied) ARABIDOPSIS THRITHORAX-RELATED PROTEINS 5 (ATXR5) AND ATXR6 are required for the deposition of H3K27me1 and for maintaining genomic stability in Arabidopsis. Reduction of ATXR5/6 activity results in activation of DNA damage response genes, along with tissue-specific derepression of transposable elements, chromocenter decompaction, and genomic instability characterized by accumulation of excess DNA from heterochromatin. more...
Organism:
blank sample; Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL29487 GPL26208
41 Samples
Download data: TXT
Series
Accession:
GSE166894
ID:
200166894

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina NovaSeq 6000 (blank sample)

Organism:
blank sample
17 Series
45 Samples
Download data
Platform
Accession:
GPL29487
ID:
100029487

4.

empty_3_SmartSeq2_S7_11E

Organism:
blank sample
Source name:
Negative control with no nuclei
Platform:
GPL29487
Series:
GSE166894 GSE166897
Download data: TXT
Sample
Accession:
GSM5087730
ID:
305087730

SRA Run Selector

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db=gds|term=GSM5087730[Accession]|query=1|qty=3|blobid=MCID_678eabe2f521160690200297|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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