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Items: 4

1.

Methyltransferase-directed orthogonal tagging and sequencing of miRNAs and bacterial small RNAs in probiotic Lactobacillus casei

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
synthetic construct; Lacticaseibacillus casei
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL27609 GPL30169
17 Samples
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Series
Accession:
GSE166932
ID:
200166932
2.

High-throughput sequencing of Lactobacillus casei BL23 sRNAs

(Submitter supplied) In the present study we characterized the sRNA profile of Lactobacillus casei BL23 using conventional and mDOT-seq approaches. In total 307 potential sRNAs were identified, 28 of which were validated by Northern hybridization. As a major portion of predicted sRNAs were shown to be conserved among the related species of Lactobacillus casei group (LCG), the results obtained in this study could serve as a valuable resource for achieving a better understanding of LCG physiology or even improving their applications in industry and medicine.
Organism:
Lacticaseibacillus casei
Type:
Expression profiling by high throughput sequencing
Platform:
GPL30169
9 Samples
Download data: TSV
Series
Accession:
GSE166930
ID:
200166930
3.

Illumina NextSeq 500 (Lacticaseibacillus casei)

Organism:
Lacticaseibacillus casei
2 Series
9 Samples
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Platform
Accession:
GPL30169
ID:
100030169
4.

L. casei BL23_mDOT-seq U_replicate 1

Organism:
Lacticaseibacillus casei
Source name:
cells
Platform:
GPL30169
Series:
GSE166930 GSE166932
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Sample
Accession:
GSM5088617
ID:
305088617
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Supplemental Content

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