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Items: 3

1.

Transcriptomic and chromatin accessibility analyses of porcine alveolar macrophages exposed to Fumonisin B1

(Submitter supplied) Fumonisin B1 (FB1) is a mycotoxin that poses a great threat to agricultural production and human and animal health. However, the molecular mechanism underlying the cytotoxic effect of FB1 to mammals has not been systematically elucidated. Here, we utilized the porcine alveolar macrophage cell line 3D4/21 as model, and applied RNA sequencing (RNA-seq) to analyze the genome-wide transcriptional alterations of mRNA, lncRNA, circRNA and miRNA before and after exposure to FB1 in six samples. more...
Organism:
Sus scrofa
Type:
Genome binding/occupancy profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL19176 GPL22475
16 Samples
Download data: CSV, XLSX
Series
Accession:
GSE190291
ID:
200190291
2.

Illumina HiSeq 4000 (Sus scrofa)

Platform
Accession:
GPL22475
ID:
100022475
3.

alveolar macrophage, FB1-3, ATAC-seq

Organism:
Sus scrofa
Source name:
FB1-3
Platform:
GPL22475
Series:
GSE190291
Download data: CSV
Sample
Accession:
GSM5719322
ID:
305719322
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