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Items: 4

1.

Linker histones mediate sequence-specific regulation of chromosomal organization and H3K27me3 enrichment over genes and telomeric repeats

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19580 GPL28290
51 Samples
Download data: BIGWIG, BW, HIC, TXT
Series
Accession:
GSE160414
ID:
200160414
2.

Linker histones mediate sequence-specific regulation of chromosomal organization and H3K27me3 enrichment over genes and telomeric repeats (ChIP-RX)

(Submitter supplied) Chromatin architecture relies on histone H1 whose central globular domain (GH1) sits on the nucleosome dyad and carboxy-terminal domain associates with linker DNA. We report that Arabidopsis H1 positively influences H3K27me3 chromatin enrichment over protein-coding genes but oppositely prevents its accumulation on telomeres and heterochromatic Interstitial Telomeric Repeats (ITRs). Contrasting with their neighboring heterochromatic environment, pericentromeric ITR regions remain highly compacted and are more prone to long-distance interactions with telomeres in H1 mutant plants. more...
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19580 GPL28290
24 Samples
Download data: BIGWIG, BW
Series
Accession:
GSE160410
ID:
200160410
3.

DNBSEQ-G400 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
54 Series
989 Samples
Download data
Platform
Accession:
GPL28290
ID:
100028290
4.

HM5_2h1trb123.BR1.input

Organism:
Arabidopsis thaliana
Source name:
Arabidopsis seedlings
Platform:
GPL28290
Series:
GSE160410 GSE160414
Download data
Sample
Accession:
GSM6705019
ID:
306705019
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Supplemental Content

db=gds|term=GSM6705019[Accession]|query=1|qty=2|blobid=MCID_6675bb31ccfbad768fa67f05|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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