U.S. flag

An official website of the United States government

Format
Sort by

Send to:

Choose Destination

Search results

Items: 4

1.

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

(Submitter supplied) For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9052
89 Samples
Download data: BED, TXT
Series
Accession:
GSE30227
ID:
200030227
2.

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [FAIRE_seq]

(Submitter supplied) The human body contains thousands of unique cell types, each with specialized functions. Cell identity is governed in large part by gene transcription programs, which are determined by regulatory elements encoded in DNA. To identify regulatory elements active in seven cell lines representative of diverse human cell types, we used DNase-seq and FAIRE-seq to map “open chromatin”. Over 870,000 DNaseI or FAIRE sites, which correspond largely to nucleosome depleted regions (NDRs), were identified across the seven cell lines, covering nearly 9% of the genome. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9052
16 Samples
Download data: BED, NARROWPEAK
Series
Accession:
GSE30225
ID:
200030225
3.

Illumina Genome Analyzer (Homo sapiens)

Platform
Accession:
GPL9052
ID:
100009052
4.

HelaS3_FAIRE_REP1

Organism:
Homo sapiens
Source name:
cervical carcinoma
Platform:
GPL9052
Series:
GSE30225 GSE30227
Download data: BED
Sample
Accession:
GSM748515
ID:
300748515
Format
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=GSM748515[Accession]|query=1|qty=2|blobid=MCID_6729c0ab4faa3262ae5fdf33|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center