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Items: 3

1.

An improved terminal ribose-modified small RNA sequencing (TRM-sRNA-seq) reveals novel features of miRNA modification and identifies HEN1-independent 2’-O-modified sRNAs derived from tRNAs

(Submitter supplied) Concomitant cloning of RNA degradation products is a major issue in standard small RNA-sequencing practices. It not only adds complexity in bona fide sRNA characterization, but also affects experimental replicability and sometimes results in library construction failure. Given that all kinds of canonical plant small RNAs bearing the 3’ end 2’-O-methylation modification, we here developed an sRNA-seq method (named terminal ribose-modified sRNA sequencing, TRM-sRNA-seq).
Organism:
Arabidopsis thaliana; Solanum lycopersicum; Zea mays; Oryza sativa
Type:
Non-coding RNA profiling by high throughput sequencing
4 related Platforms
54 Samples
Download data: TXT
Series
Accession:
GSE244009
ID:
200244009
2.

Illumina NovaSeq 6000 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
516 Series
9361 Samples
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Platform
Accession:
GPL26208
ID:
100026208
3.

L.er_ inflorescence_sRNA-seq(CK)_Rep2

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL26208
Series:
GSE244009
Download data: TXT
Sample
Accession:
GSM7804766
ID:
307804766
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db=gds|term=GSM7804766[Accession]|query=1|qty=5|blobid=MCID_674c9f13f363504c2f2db746|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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