GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Mus musculus

Type:

Expression profiling by array; Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing

4 related Platforms

29 Samples

Download data: CEL, PAIR, WIG

(Submitter supplied) The clustered homeobox proteins play crucial roles in development, hematopoiesis and leukemia yet the targets they regulate and their mechanisms of action are poorly understood. Here, we identified the binding sites for Hoxa9 and the Hox cofactor Meis1 on a genome-wide level and profiled their associated epigenetic modifications and transcriptional targets. Hoxa9 and the Hox cofactor Meis1 co-bind at hundreds of highly evolutionarily-conserved sites, most of which are distant from transcription start sites. more...

Organism:

Mus musculus

Type:

Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL14850 GPL14849

11 Samples

Download data: PAIR

(Submitter supplied) Annotation in this record based on UCSC Mus musculus 8, Feb 2006 Genomic regions bound by Hoxa9/Meis1 in hematopoietic cells, isothermal tiling oligos at 100bp DESIGN_ID : 537603 native array description file: 100702_YH_MM8_regions_ChIP.ndf native array description file: 100702_YH_MM8_regions_ChIP.pos Protocol: see manufacturer's web site www.nimblegen.com

Organism:

Mus musculus

2 Series

5 Samples

Download data: NDF, POS